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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_0722 and Psest_0723 are separated by 153 nucleotides
Psest_0723 and Psest_0724 are separated by 156 nucleotides
Psest_0724 and Psest_0725 are separated by 104 nucleotides
Psest_0725 and Psest_0726 are separated by 16 nucleotides
Psest_0722: Psest_0722 - Predicted ATPase, at 791,391 to 792,563
_0722
Psest_0723: Psest_0723 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 792,717 to 793,706
_0723
Psest_0724: Psest_0724 - Deoxyinosine 3'endonuclease (endonuclease V), at 793,863 to 794,591
_0724
Psest_0725: Psest_0725 - Negative regulator of beta-lactamase expression, at 794,696 to 795,247
_0725
Psest_0726: Psest_0726 - Membrane protein required for beta-lactamase induction, at 795,264 to 796,100
_0726
Group
Condition
Psest
_0722
Psest
_0723
Psest
_0724
Psest
_0725
Psest
_0726
stress
2-Furfuraldehyde 0.05 vol%
-2.3
-0.1
+0.2
-3.3
-0.6
stress
Def Carbenicillin 0.02 mg/ml
-0.6
-0.7
-0.4
-3.8
+0.2
stress
Carbenicillin 0.0065 mg/ml
-1.2
-0.2
+0.1
-3.3
-0.4
stress
Carbenicillin 0.0065 mg/ml
-1.5
-0.3
+0.1
-2.8
-0.1
carbon source
L-Proline (C)
-1.1
-0.0
-0.2
-3.1
-0.1
stress
Phosphomycin 0.012 mg/ml
-0.9
-0.3
-0.2
-2.9
-0.0
stress
Def Chloride 400 mM
-2.9
-0.4
-0.7
+0.2
-0.5
carbon source
L-tyrosine (C)
-1.5
+0.2
-0.3
-2.1
-0.2
carbon source
L-Asparagine (C)
-1.7
+0.1
+0.1
-2.4
+0.1
stress
Carbenicillin 0.008 mg/ml
-1.4
-0.2
+0.6
-2.4
-0.1
carbon source
succinate (C)
-4.0
+0.1
+0.3
+0.1
+0.1
carbon source
Glycolic Acid (C)
+0.5
+0.0
+0.2
-3.9
+0.0
stress
L-Lysine 200 mM
+0.6
+0.1
-0.2
-3.0
-0.3
RCH2 grown on a colony of Serratia
-1.8
+0.2
-0.6
+0.7
-1.1
stress
Dimethyl Sulfoxide 5 vol%
+0.7
+0.0
+0.3
-3.6
-0.1
carbon source
L-tyrosine (C)
-1.5
+0.2
+0.6
-2.0
+0.2
stress
Thallium(I) acetate 0.1 mg/ml
+1.3
-0.1
-0.2
-3.2
+0.3
stress
Thallium(I) acetate 0.09 mg/ml
+1.0
-0.0
-0.3
-2.7
+0.3
stress
Choline Lysine 20 mM
+1.6
-0.1
+0.0
-2.9
-0.4
stress
Choline Lysine 20 mM
+1.6
+0.1
+0.1
-2.8
-0.3
stress
Choline chloride 90 mM
+1.6
-0.0
+0.3
-2.7
-0.4
stress
Neomycin 0.004 mg/ml
+2.0
-0.2
+0.2
-2.9
-0.2
stress
Neomycin 0.004 mg/ml
+1.5
+0.1
+0.1
-2.8
+0.3
stress
L-Lysine 200 mM
+1.5
+0.0
+0.7
-3.0
+0.1
stress
Choline chloride 90 mM
+2.2
-0.4
+0.2
-2.1
-0.4
stress
Neomycin 0.004 mg/ml
+2.0
-0.1
+0.1
-1.9
-0.1
stress
Cephalothin 0.04 mg/ml
+2.0
-0.0
+0.6
-1.8
+0.4
stress
nitrate 250 mM
+2.5
+0.1
+0.5
-1.9
+0.3
stress
Fusidic 0.016 mg/ml
+2.9
+0.1
+0.3
-0.9
+0.2
stress
Def Benzalkonium Chloride 0.002 mg/ml
+3.5
+0.3
+0.4
+0.7
+0.5
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