Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0067 and Psest_0068 are separated by 101 nucleotidesPsest_0068 and Psest_0069 are separated by 79 nucleotidesPsest_0069 and Psest_0070 are separated by 419 nucleotidesPsest_0070 and Psest_0071 overlap by 13 nucleotides Psest_0067: Psest_0067 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 67,502 to 68,500 _0067 Psest_0068: Psest_0068 - Amidases related to nicotinamidase, at 68,602 to 69,156 _0068 Psest_0069: Psest_0069 - UDP-glucose-4-epimerase, at 69,236 to 70,300 _0069 Psest_0070: Psest_0070 - Glycosyltransferase, at 70,720 to 71,904 _0070 Psest_0071: Psest_0071 - UDP-galactopyranose mutase, at 71,892 to 73,112 _0071
Group Condition Psest_0067 Psest_0068 Psest_0069 Psest_0070 Psest_0071
RCH2 grown on a colony of N2C3 -0.2 N.D. -1.3 -0.4 -0.0
stress Def Chlorate 40 mM -1.7 N.D. +0.0 -0.0 -0.1
stress Fusidic 0.016 mg/ml -1.3 N.D. -0.2 -0.1 -0.0
stress sodium fluoride 8.5 mM -1.6 N.D. -0.1 +0.2 -0.0
temperature LB 26C sample1 -1.5 N.D. +0.2 +0.1 -0.1
stress Def Chlorate 20 mM -1.2 N.D. -0.1 +0.1 -0.0
stress Def 2-Furfuraldehyde 0.032 vol% -1.6 N.D. +0.4 -0.1 +0.2
nitrogen source L-Glutamic (N) -0.7 N.D. -0.5 +0.2 -0.2
stress perchlorate 25 mM -1.0 N.D. -0.5 +0.3 +0.1
lb LB -1.0 N.D. -0.3 +0.1 +0.2
stress benzoic 0.4 mg/ml -0.8 N.D. -0.6 +0.2 +0.1
RCH2 grown on a colony of N2A2 -1.2 N.D. -0.1 +0.0 +0.2
stress 2-Furfuraldehyde 0.05 vol% -0.7 N.D. -0.4 +0.6 -0.4
stress Vanillin 2 mM -1.4 N.D. +0.2 +0.1 +0.3
carbon source propionate (C) -0.9 N.D. -0.2 +0.5 +0.1
carbon source L-tyrosine (C) -1.0 N.D. -0.1 +0.2 +0.5
stress Chloride 200 mM -1.0 N.D. +0.4 -0.1 +0.3
nutrient L-Histidine -0.6 N.D. +0.3 -0.3 +0.4
stress nitrate 200 mM -1.0 N.D. +0.3 +0.3 +0.3
stress D-Cycloserine 0.032 mg/ml +0.7 N.D. -0.3 +0.2 +0.6
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +1.2 N.D. +0.2 +0.0 -0.2
stress Cobalt chloride 0.05 mM +0.9 N.D. +0.1 +0.4 -0.2
stress nitrite 2.5 mM +1.1 N.D. -0.3 +0.2 +0.2
stress 5-Hydroxymethylfurfural 5 mM +1.0 N.D. +0.3 -0.1 +0.1
stress Doxycycline hyclate 0.0002 mg/ml +1.8 N.D. -0.1 -0.2 -0.2
nitrogen source nitrite (N) +0.6 N.D. +0.0 +0.3 +0.6
stress Benzethonium chloride 0.01 mM +1.6 N.D. +0.2 -0.1 -0.1
metal limitation Lactate-nitrite with YE; anaerobic; sample3 +1.3 N.D. +0.3 +0.0 +0.2
RCH2 grown on a colony of Serratia +0.7 N.D. +0.6 +0.3 +0.2
RCH2 grown on a colony of Serratia +0.9 N.D. +0.6 +0.3 +0.3
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