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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_0067 and Psest_0068 are separated by 101 nucleotides
Psest_0068 and Psest_0069 are separated by 79 nucleotides
Psest_0069 and Psest_0070 are separated by 419 nucleotides
Psest_0070 and Psest_0071 overlap by 13 nucleotides
Psest_0067: Psest_0067 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 67,502 to 68,500
_0067
Psest_0068: Psest_0068 - Amidases related to nicotinamidase, at 68,602 to 69,156
_0068
Psest_0069: Psest_0069 - UDP-glucose-4-epimerase, at 69,236 to 70,300
_0069
Psest_0070: Psest_0070 - Glycosyltransferase, at 70,720 to 71,904
_0070
Psest_0071: Psest_0071 - UDP-galactopyranose mutase, at 71,892 to 73,112
_0071
Group
Condition
Psest
_0067
Psest
_0068
Psest
_0069
Psest
_0070
Psest
_0071
RCH2 grown on a colony of N2C3
-0.2
N.D.
-1.3
-0.4
-0.0
stress
Def Chlorate 40 mM
-1.7
N.D.
+0.0
-0.0
-0.1
stress
Fusidic 0.016 mg/ml
-1.3
N.D.
-0.2
-0.1
-0.0
stress
sodium fluoride 8.5 mM
-1.6
N.D.
-0.1
+0.2
-0.0
temperature
LB 26C sample1
-1.5
N.D.
+0.2
+0.1
-0.1
stress
Def Chlorate 20 mM
-1.2
N.D.
-0.1
+0.1
-0.0
stress
Def 2-Furfuraldehyde 0.032 vol%
-1.6
N.D.
+0.4
-0.1
+0.2
nitrogen source
L-Glutamic (N)
-0.7
N.D.
-0.5
+0.2
-0.2
stress
perchlorate 25 mM
-1.0
N.D.
-0.5
+0.3
+0.1
lb
LB
-1.0
N.D.
-0.3
+0.1
+0.2
stress
benzoic 0.4 mg/ml
-0.8
N.D.
-0.6
+0.2
+0.1
RCH2 grown on a colony of N2A2
-1.2
N.D.
-0.1
+0.0
+0.2
stress
2-Furfuraldehyde 0.05 vol%
-0.7
N.D.
-0.4
+0.6
-0.4
stress
Vanillin 2 mM
-1.4
N.D.
+0.2
+0.1
+0.3
carbon source
propionate (C)
-0.9
N.D.
-0.2
+0.5
+0.1
carbon source
L-tyrosine (C)
-1.0
N.D.
-0.1
+0.2
+0.5
stress
Chloride 200 mM
-1.0
N.D.
+0.4
-0.1
+0.3
nutrient
L-Histidine
-0.6
N.D.
+0.3
-0.3
+0.4
stress
nitrate 200 mM
-1.0
N.D.
+0.3
+0.3
+0.3
stress
D-Cycloserine 0.032 mg/ml
+0.7
N.D.
-0.3
+0.2
+0.6
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+1.2
N.D.
+0.2
+0.0
-0.2
stress
Cobalt chloride 0.05 mM
+0.9
N.D.
+0.1
+0.4
-0.2
stress
nitrite 2.5 mM
+1.1
N.D.
-0.3
+0.2
+0.2
stress
5-Hydroxymethylfurfural 5 mM
+1.0
N.D.
+0.3
-0.1
+0.1
stress
Doxycycline hyclate 0.0002 mg/ml
+1.8
N.D.
-0.1
-0.2
-0.2
nitrogen source
nitrite (N)
+0.6
N.D.
+0.0
+0.3
+0.6
stress
Benzethonium chloride 0.01 mM
+1.6
N.D.
+0.2
-0.1
-0.1
metal limitation
Lactate-nitrite with YE; anaerobic; sample3
+1.3
N.D.
+0.3
+0.0
+0.2
RCH2 grown on a colony of Serratia
+0.7
N.D.
+0.6
+0.3
+0.2
RCH2 grown on a colony of Serratia
+0.9
N.D.
+0.6
+0.3
+0.3
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