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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0692 and Psest_0693 are separated by 174 nucleotides
Psest_0693 and Psest_0694 are separated by 180 nucleotides
Psest_0694 and Psest_0695 are separated by 28 nucleotides
Psest_0695 and Psest_0696 are separated by 34 nucleotides
Psest_0692: Psest_0692 - rRNA methylase, putative, group 3, at 756,463 to 757,218
_0692
Psest_0693: Psest_0693 - His Kinase A (phosphoacceptor) domain./PAS fold./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase., at 757,393 to 759,555
_0693
Psest_0694: Psest_0694 - ribosomal protein S6, at 759,736 to 760,152
_0694
Psest_0695: Psest_0695 - ribosomal protein S18, at 760,181 to 760,411
_0695
Psest_0696: Psest_0696 - hypothetical protein, at 760,446 to 761,339
_0696
Group
Condition
Psest
_0692
Psest
_0693
Psest
_0694
Psest
_0695
Psest
_0696
RCH2 grown on a colony of Serratia
-2.1
-1.5
N.D.
N.D.
-1.1
stress
Furfuryl Alcohol 0.05 vol%
-2.2
-0.3
N.D.
N.D.
-1.2
stress
Spectinomycin 0.00625 mg/ml
-0.1
-0.6
N.D.
N.D.
-2.6
stress
Choline Lysine 20 mM
+0.3
-0.2
N.D.
N.D.
-2.9
carbon source
L-tyrosine (C)
-1.6
+2.2
N.D.
N.D.
-1.5
stress
Gentamicin 0.0016 mg/ml
+0.7
+0.4
N.D.
N.D.
-1.9
stress
Cobalt chloride 0.05 mM
-1.7
+0.7
N.D.
N.D.
+0.5
nitrogen source
L-Valine (N)
-1.3
+1.5
N.D.
N.D.
+0.2
carbon source
L-tyrosine (C)
+0.2
+2.0
N.D.
N.D.
-1.4
stress
Choline chloride 90 mM
+2.3
-0.5
N.D.
N.D.
-0.9
radiation
Ionizing radiation, 319.06 Gy,
-0.6
+2.3
N.D.
N.D.
+0.3
radiation
Ionizing radiation, 319.06 Gy,
+0.8
+2.2
N.D.
N.D.
-0.5
stress
Fusidic 0.016 mg/ml
+0.9
+0.5
N.D.
N.D.
+1.4
stress
Def 5-Hydroxymethylfurfural 5 mM
+1.2
+0.9
N.D.
N.D.
+0.8
stress
Def Polymyxin B sulfate 0.00008 mg/ml
+1.2
+0.8
N.D.
N.D.
+1.0
stress
A22 0.005 mg/ml
+0.3
+2.2
N.D.
N.D.
+0.7
carbon source
RCH2 defined media
+1.4
+0.7
N.D.
N.D.
+1.2
stress
Def Polymyxin B sulfate 0.0001 mg/ml
+1.0
+1.1
N.D.
N.D.
+1.3
radiation
Ionizing radiation, 0 Gy
+0.8
+2.1
N.D.
N.D.
+0.7
stress
nitrate 250 mM
+1.2
+1.5
N.D.
N.D.
+1.1
stress
Def Carbenicillin 0.008 mg/ml
+1.7
+0.8
N.D.
N.D.
+1.4
stress
Def Benzethonium chloride 0.008 mM
+1.7
+0.5
N.D.
N.D.
+1.7
nitrogen source
nitrite (N)
+1.4
+1.3
N.D.
N.D.
+1.2
nitrogen source
L-Isoleucine (N)
+1.1
+1.9
N.D.
N.D.
+1.1
carbon source
butyrate (C)
+0.6
+2.1
N.D.
N.D.
+1.4
anaerobic
nitrate reduction - anaerobic
+1.5
+1.5
N.D.
N.D.
+1.4
stress
Cephalothin 0.04 mg/ml
+2.1
+1.7
N.D.
N.D.
+1.9
stress
Def 2-Furfuraldehyde 0.032 vol%
+1.9
+1.5
N.D.
N.D.
+2.4
nitrogen source
nitrite (N)
+2.2
+2.1
N.D.
N.D.
+1.9
stress
Def Benzalkonium Chloride 0.002 mg/ml
+2.3
+1.9
N.D.
N.D.
+2.0
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