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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0667 and Psest_0668 are separated by 6 nucleotides
Psest_0668 and Psest_0669 are separated by 85 nucleotides
Psest_0669 and Psest_0670 are separated by 14 nucleotides
Psest_0670 and Psest_0671 are separated by 196 nucleotides
Psest_0667: Psest_0667 - Phosphodiesterase/alkaline phosphatase D, at 726,330 to 727,883
_0667
Psest_0668: Psest_0668 - Ethanolamine ammonia-lyase, small subunit, at 727,890 to 728,684
_0668
Psest_0669: Psest_0669 - Ethanolamine ammonia-lyase, large subunit, at 728,770 to 730,161
_0669
Psest_0670: Psest_0670 - ethanolamine permease, at 730,176 to 731,624
_0670
Psest_0671: Psest_0671 - NAD-dependent aldehyde dehydrogenases, at 731,821 to 733,341
_0671
Group
Condition
Psest
_0667
Psest
_0668
Psest
_0669
Psest
_0670
Psest
_0671
nitrogen source
L-Isoleucine (N)
-0.4
-0.7
-0.5
-0.6
-0.2
stress
Def Phosphomycin 0.125 mg/ml
-0.3
-0.6
-0.5
-0.2
-0.2
stress
Def Cephalothin 0.08 mg/ml
-0.3
-0.6
-0.6
-0.1
+0.0
stress
sodium fluoride 6.25 mM
-0.4
-0.5
-0.5
-0.2
-0.1
lb
LB
-0.3
-0.3
-0.7
+0.0
-0.2
stress
5-Hydroxymethylfurfural 5 mM
-0.2
-0.3
-0.3
-0.2
-0.4
RCH2 grown on a colony of N2F3
-0.3
-0.3
-0.3
-0.4
+0.1
nitrogen source
nitrite (N)
-0.4
+0.2
-0.1
-0.5
+0.2
vitamin
With vitamins t2
+0.1
-0.3
-0.6
+0.1
+0.1
nitrogen source
L-Glutamic (N)
+0.2
+0.1
-0.7
-0.2
+0.1
RCH2 grown on a colony of N2F3
+0.1
+0.3
-0.4
-0.4
-0.1
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.0
-0.2
+0.3
-0.5
-0.2
stress
Furfuryl Alcohol 0.05 vol%
-0.4
+0.1
+0.1
+0.3
-0.4
stress
Nalidixic 0.00390625 mg/ml
-0.2
+0.2
+0.5
-0.1
-0.6
stress
nitrate 200 mM
+0.1
-0.4
+0.6
-0.2
-0.2
stress
Furfuryl Alcohol 0.3 vol%
-0.5
+0.2
+0.4
+0.2
-0.2
radiation
Ionizing radiation, 319.06 Gy,
+0.6
-0.3
+0.0
+0.1
-0.2
stress
Gentamicin 0.0016 mg/ml
+0.4
-0.1
+0.3
-0.2
+0.3
stress
Nalidixic 0.001 mg/ml
+0.3
+0.2
+0.4
-0.1
+0.2
stress
Fusidic 0.016 mg/ml
+0.3
+0.3
+0.2
-0.1
+0.3
stress
Def Chloride 400 mM
-0.1
+0.2
+0.5
+0.2
+0.2
nitrogen source
Parabanic Acid (N)
+0.2
+0.2
+0.5
+0.2
+0.2
stress
benzoic 0.4 mg/ml
+0.5
+0.2
+0.2
+0.2
+0.1
stress
Def Polymyxin B sulfate 0.00008 mg/ml
+0.4
+0.3
+0.3
-0.0
+0.3
nitrogen source
D-Alanine (N)
+0.3
+0.3
+0.4
+0.3
+0.1
stress
nitrate 250 mM
+0.7
+0.3
+0.0
-0.1
+0.4
stress
Chlorate 75 mM
+0.8
+0.1
+0.2
+0.2
+0.2
stress
Def Neomycin 0.0008 mg/ml
+0.4
+0.6
+0.3
+0.3
-0.2
stress
Def Carbenicillin 0.008 mg/ml
+0.7
+0.3
+0.8
-0.3
+0.2
stress
Def Carbenicillin 0.02 mg/ml
+0.2
+0.5
+0.9
+0.2
+0.4
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