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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_0063 and Psest_0064 are separated by 171 nucleotides
Psest_0064 and Psest_0065 are separated by 271 nucleotides
Psest_0065 and Psest_0066 are separated by 276 nucleotides
Psest_0066 and Psest_0067 are separated by 8 nucleotides
Psest_0063: Psest_0063 - tryptophan synthase, beta subunit, at 62,768 to 63,979
_0063
Psest_0064: Psest_0064 - Transcriptional regulator, at 64,151 to 65,053
_0064
Psest_0065: Psest_0065 - Subtilisin-like serine proteases, at 65,325 to 66,716
_0065
Psest_0066: Psest_0066 - Protein of unknown function (DUF3060)., at 66,993 to 67,493
_0066
Psest_0067: Psest_0067 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 67,502 to 68,500
_0067
Group
Condition
Psest
_0063
Psest
_0064
Psest
_0065
Psest
_0066
Psest
_0067
RCH2 grown on a colony of ecoli
-5.0
-0.2
-0.6
-2.6
-0.6
nitrogen source
L-Alanine (N)
-6.0
-0.1
-0.2
-1.6
-0.1
carbon source
D-Lactate (C)
-5.6
-0.0
-0.1
-0.8
-0.6
carbon source
D-Maltose (C)
-6.0
-0.3
-0.2
-0.0
-0.5
carbon source
L-Malic (C)
-5.4
-0.1
+0.1
-0.8
-0.8
stress
Vancomycin 0.016 mg/ml
-3.8
+0.1
-0.1
-2.0
-1.1
carbon source
acetate (C)
-5.2
+0.4
-0.1
-0.9
-0.8
carbon source
Tween 20 (C)
-5.6
+0.3
+0.0
-1.1
-0.2
carbon source
L-Leucine (C)
-6.1
-0.1
+0.1
+0.5
-0.7
carbon source
Glycerol (C)
-5.3
+0.2
+0.2
-1.1
-0.1
carbon source
L-Malic (C)
-5.5
-0.1
+0.1
-1.0
+0.2
carbon source
Fumarate (C)
-5.7
+0.5
+0.1
-0.6
-0.5
stress
nitrate 200 mM
-5.3
+1.1
+0.1
-1.0
-1.0
carbon source
D-Fructose (C)
-5.8
+0.0
-0.1
+0.5
-0.5
stress
nitrate 200 mM
-5.4
+1.4
-0.1
-1.1
-0.7
carbon source
Fumarate (C)
-5.7
+0.3
+0.2
+0.0
-0.7
carbon source
L-Lactate (C)
-6.1
+0.1
+0.3
-0.4
+0.5
stress
nitrite 2.5 mM
-5.7
+1.1
-0.0
-0.3
-0.7
stress
Chloride 200 mM
-4.9
+0.7
+0.3
-0.7
-0.2
nitrogen source
nitrite (N)
-5.2
+0.4
+0.3
-0.3
+0.7
nutrient
L-tyrosine
-4.1
-0.3
+0.2
+1.3
-1.0
stress
D-Cycloserine 0.032 mg/ml
-5.3
+1.2
+0.1
+0.6
-0.5
nutrient
Min media with glucose
-5.0
+0.7
+0.4
-0.4
+0.4
carbon source
L-Proline (C)
-4.1
+0.7
+0.1
-1.3
+0.9
stress
Def Fusidic 0.064 mg/ml
-4.2
-1.2
-0.1
+0.7
+1.1
stress
D-Cycloserine 0.032 mg/ml
-5.7
+1.4
+0.5
-0.1
+0.7
carbon source
L-tyrosine (C)
-4.2
+1.3
+0.1
+1.0
-1.0
stress
nitrite 2.5 mM
-5.4
+1.0
-0.0
+0.9
+1.1
stress
nitrite 2.5 mM
-5.4
+1.3
+0.0
+0.9
+1.0
stress
Paraquat dichloride 0.015 mg/ml
-4.3
+2.2
+0.0
+0.4
-0.2
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