Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0063 and Psest_0064 are separated by 171 nucleotidesPsest_0064 and Psest_0065 are separated by 271 nucleotidesPsest_0065 and Psest_0066 are separated by 276 nucleotidesPsest_0066 and Psest_0067 are separated by 8 nucleotides Psest_0063: Psest_0063 - tryptophan synthase, beta subunit, at 62,768 to 63,979 _0063 Psest_0064: Psest_0064 - Transcriptional regulator, at 64,151 to 65,053 _0064 Psest_0065: Psest_0065 - Subtilisin-like serine proteases, at 65,325 to 66,716 _0065 Psest_0066: Psest_0066 - Protein of unknown function (DUF3060)., at 66,993 to 67,493 _0066 Psest_0067: Psest_0067 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 67,502 to 68,500 _0067
Group Condition Psest_0063 Psest_0064 Psest_0065 Psest_0066 Psest_0067
RCH2 grown on a colony of ecoli -5.0 -0.2 -0.6 -2.6 -0.6
nitrogen source L-Alanine (N) -6.0 -0.1 -0.2 -1.6 -0.1
carbon source D-Lactate (C) -5.6 -0.0 -0.1 -0.8 -0.6
carbon source D-Maltose (C) -6.0 -0.3 -0.2 -0.0 -0.5
carbon source L-Malic (C) -5.4 -0.1 +0.1 -0.8 -0.8
stress Vancomycin 0.016 mg/ml -3.8 +0.1 -0.1 -2.0 -1.1
carbon source acetate (C) -5.2 +0.4 -0.1 -0.9 -0.8
carbon source Tween 20 (C) -5.6 +0.3 +0.0 -1.1 -0.2
carbon source L-Leucine (C) -6.1 -0.1 +0.1 +0.5 -0.7
carbon source Glycerol (C) -5.3 +0.2 +0.2 -1.1 -0.1
carbon source L-Malic (C) -5.5 -0.1 +0.1 -1.0 +0.2
carbon source Fumarate (C) -5.7 +0.5 +0.1 -0.6 -0.5
stress nitrate 200 mM -5.3 +1.1 +0.1 -1.0 -1.0
carbon source D-Fructose (C) -5.8 +0.0 -0.1 +0.5 -0.5
stress nitrate 200 mM -5.4 +1.4 -0.1 -1.1 -0.7
carbon source Fumarate (C) -5.7 +0.3 +0.2 +0.0 -0.7
carbon source L-Lactate (C) -6.1 +0.1 +0.3 -0.4 +0.5
stress nitrite 2.5 mM -5.7 +1.1 -0.0 -0.3 -0.7
stress Chloride 200 mM -4.9 +0.7 +0.3 -0.7 -0.2
nitrogen source nitrite (N) -5.2 +0.4 +0.3 -0.3 +0.7
nutrient L-tyrosine -4.1 -0.3 +0.2 +1.3 -1.0
stress D-Cycloserine 0.032 mg/ml -5.3 +1.2 +0.1 +0.6 -0.5
nutrient Min media with glucose -5.0 +0.7 +0.4 -0.4 +0.4
carbon source L-Proline (C) -4.1 +0.7 +0.1 -1.3 +0.9
stress Def Fusidic 0.064 mg/ml -4.2 -1.2 -0.1 +0.7 +1.1
stress D-Cycloserine 0.032 mg/ml -5.7 +1.4 +0.5 -0.1 +0.7
carbon source L-tyrosine (C) -4.2 +1.3 +0.1 +1.0 -1.0
stress nitrite 2.5 mM -5.4 +1.0 -0.0 +0.9 +1.1
stress nitrite 2.5 mM -5.4 +1.3 +0.0 +0.9 +1.0
stress Paraquat dichloride 0.015 mg/ml -4.3 +2.2 +0.0 +0.4 -0.2
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