Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0661 and Psest_0662 are separated by 16 nucleotidesPsest_0662 and Psest_0663 are separated by 72 nucleotidesPsest_0663 and Psest_0664 are separated by 143 nucleotidesPsest_0664 and Psest_0665 are separated by 84 nucleotides Psest_0661: Psest_0661 - PAS domain S-box, at 718,437 to 720,476 _0661 Psest_0662: Psest_0662 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 720,493 to 721,146 _0662 Psest_0663: Psest_0663 - PAS fold., at 721,219 to 723,018 _0663 Psest_0664: Psest_0664 - diguanylate cyclase (GGDEF) domain, at 723,162 to 724,652 _0664 Psest_0665: Psest_0665 - Inorganic pyrophosphatase, at 724,737 to 725,264 _0665
Group Condition Psest_0661 Psest_0662 Psest_0663 Psest_0664 Psest_0665
nitrogen source L-Isoleucine (N) -0.5 -1.1 -0.6 -0.9 N.D.
stress Choline chloride 90 mM +0.1 -2.7 -0.2 -0.0 N.D.
stress Def Cephalothin 0.08 mg/ml -0.2 -1.4 -0.8 -0.4 N.D.
stress Paraquat dichloride 0.015 mg/ml -0.5 -2.2 +0.3 -0.0 N.D.
stress sodium fluoride 6.25 mM -0.1 -1.2 -0.8 -0.0 N.D.
stress Benzethonium chloride 0.0125 mM +0.1 -1.5 -0.4 -0.1 N.D.
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.3 -0.9 -0.8 -0.3 N.D.
stress Polymyxin B sulfate 0.0001 mg/ml +0.6 -2.5 -0.0 +0.3 N.D.
stress Nickel (II) chloride 0.9 mM -0.1 -1.6 -0.1 +0.3 N.D.
nitrogen source nitrite (N) +0.1 -1.4 +0.3 -0.3 N.D.
stress nitrate 200 mM -0.1 -1.4 +0.5 -0.1 N.D.
stress Fusidic 0.016 mg/ml +0.7 -1.3 +0.1 +0.2 N.D.
stress Def A22 0.015 mg/ml -0.8 +0.9 -0.0 -0.2 N.D.
nitrogen source Parabanic Acid (N) +0.7 -1.4 +0.2 +0.4 N.D.
stress Paraquat dichloride 0.015 mg/ml -0.2 -0.8 +0.8 +0.3 N.D.
stress Def Carbenicillin 0.02 mg/ml +0.9 +0.2 -0.8 +0.2 N.D.
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.3 +1.2 -0.3 -0.3 N.D.
stress benzoic 0.4 mg/ml -0.3 +0.8 -0.1 +0.7 N.D.
stress 2-Furfuraldehyde 0.05 vol% -0.2 +1.7 -0.4 +0.1 N.D.
stress Def methylglyoxal 0.01 vol% +0.7 +1.2 +0.1 -0.2 N.D.
RCH2 grown on a colony of ecoli -0.2 +2.0 +0.3 -0.2 N.D.
RCH2 grown on a colony of N2F3 -0.4 +1.9 +0.1 +0.3 N.D.
stress Lactate-nitrate; anaerobic; dichromate stress sample1 +0.5 +1.5 +0.0 -0.1 N.D.
stress Def Polymyxin B sulfate 0.00008 mg/ml +1.0 +0.6 +0.2 +0.2 N.D.
stress Def Chlorate 20 mM +0.5 +1.1 +0.2 +0.3 N.D.
stress Furfuryl Alcohol 0.3 vol% +0.5 +1.0 +0.5 +0.2 N.D.
stress Def Neomycin 0.0008 mg/ml +0.5 +1.1 +0.6 +0.0 N.D.
metal limitation Lactate-nitrite with YE; anaerobic; with copper; sample2 +0.4 +1.4 +0.1 +0.3 N.D.
stress Nalidixic 0.001 mg/ml +0.6 +0.8 +0.3 +0.5 N.D.
stress Chlorate 75 mM +1.6 +1.3 +0.5 +0.0 N.D.
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