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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_0059 and Psest_0060 are separated by 2 nucleotides
Psest_0060 and Psest_0061 are separated by 118 nucleotides
Psest_0061 and Psest_0062 are separated by 175 nucleotides
Psest_0062 and Psest_0063 overlap by 4 nucleotides
Psest_0059: Psest_0059 - hypothetical protein, at 60,782 to 61,153
_0059
Psest_0060: Psest_0060 - Predicted Fe-S protein, at 61,156 to 61,338
_0060
Psest_0061: Psest_0061 - hypothetical protein, at 61,457 to 61,786
_0061
Psest_0062: Psest_0062 - tryptophan synthase, alpha subunit, at 61,962 to 62,771
_0062
Psest_0063: Psest_0063 - tryptophan synthase, beta subunit, at 62,768 to 63,979
_0063
Group
Condition
Psest
_0059
Psest
_0060
Psest
_0061
Psest
_0062
Psest
_0063
carbon source
L-Asparagine (C)
N.D.
-0.8
-0.9
-6.7
-5.2
RCH2 grown on a colony of ecoli
N.D.
-1.4
-1.5
-5.4
-5.0
carbon source
L-Leucine (C)
N.D.
-0.7
+0.1
-6.0
-6.1
carbon source
D-Alanine (C)
N.D.
-0.6
-0.4
-6.3
-5.4
carbon source
D-Alanine (C)
N.D.
-0.4
+0.1
-6.3
-6.0
carbon source
L-tyrosine (C)
N.D.
-2.4
-1.8
-4.1
-4.2
carbon source
a-Ketoglutaric (C)
N.D.
-0.7
-0.0
-6.1
-5.8
carbon source
D,L-Lactate (C)
N.D.
+0.1
-0.1
-6.6
-5.8
nitrogen source
L-Alanine (N)
N.D.
-0.1
+0.3
-6.3
-6.0
carbon source
succinate (C)
N.D.
-0.1
+0.3
-6.5
-5.7
carbon source
L-Lactate (C)
N.D.
-0.7
+0.9
-6.0
-6.1
carbon source
L-Glutamic (C)
N.D.
+0.3
-0.0
-6.3
-5.8
carbon source
D-Glucose (C)
N.D.
-0.8
+0.3
-5.6
-5.7
stress
D-Cycloserine 0.032 mg/ml
N.D.
+0.5
-0.2
-6.4
-5.7
nitrogen source
D-Alanine (N)
N.D.
+0.0
+0.3
-6.6
-5.4
carbon source
Fumarate (C)
N.D.
+0.5
+0.3
-6.2
-5.7
carbon source
D-Lactate (C)
N.D.
-0.3
+0.6
-6.0
-5.4
carbon source
D-Lactate (C)
N.D.
-0.4
+0.5
-5.6
-5.6
stress
nitrite 2.5 mM
N.D.
+0.7
-0.1
-6.2
-5.4
nitrogen source
D-Alanine (N)
N.D.
+0.5
+0.2
-6.4
-5.2
carbon source
D-Fructose (C)
N.D.
+0.5
+0.1
-5.7
-5.8
carbon source
D-Maltose (C)
N.D.
-0.0
+0.7
-5.8
-5.7
carbon source
D-Maltose (C)
N.D.
-0.3
+0.8
-5.3
-6.0
nutrient
L-Histidine
N.D.
+0.2
+0.5
-6.3
-5.1
carbon source
D,L-Lactate (C)
N.D.
-0.4
+1.0
-5.8
-5.3
carbon source
succinate (C)
N.D.
+0.5
+0.7
-6.0
-5.5
carbon source
Glycolic Acid (C)
N.D.
-0.7
+1.1
-5.9
-4.6
nitrogen source
Cytosine (N)
N.D.
+0.6
+0.7
-5.8
-5.3
stress
Def Benzethonium chloride 0.008 mM
N.D.
+0.0
+1.1
-6.3
-4.7
nitrogen source
nitrite (N)
N.D.
+1.1
+0.9
-5.8
-4.5
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