Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0059 and Psest_0060 are separated by 2 nucleotidesPsest_0060 and Psest_0061 are separated by 118 nucleotidesPsest_0061 and Psest_0062 are separated by 175 nucleotidesPsest_0062 and Psest_0063 overlap by 4 nucleotides Psest_0059: Psest_0059 - hypothetical protein, at 60,782 to 61,153 _0059 Psest_0060: Psest_0060 - Predicted Fe-S protein, at 61,156 to 61,338 _0060 Psest_0061: Psest_0061 - hypothetical protein, at 61,457 to 61,786 _0061 Psest_0062: Psest_0062 - tryptophan synthase, alpha subunit, at 61,962 to 62,771 _0062 Psest_0063: Psest_0063 - tryptophan synthase, beta subunit, at 62,768 to 63,979 _0063
Group Condition Psest_0059 Psest_0060 Psest_0061 Psest_0062 Psest_0063
carbon source L-Asparagine (C) N.D. -0.8 -0.9 -6.7 -5.2
RCH2 grown on a colony of ecoli N.D. -1.4 -1.5 -5.4 -5.0
carbon source L-Leucine (C) N.D. -0.7 +0.1 -6.0 -6.1
carbon source D-Alanine (C) N.D. -0.6 -0.4 -6.3 -5.4
carbon source D-Alanine (C) N.D. -0.4 +0.1 -6.3 -6.0
carbon source L-tyrosine (C) N.D. -2.4 -1.8 -4.1 -4.2
carbon source a-Ketoglutaric (C) N.D. -0.7 -0.0 -6.1 -5.8
carbon source D,L-Lactate (C) N.D. +0.1 -0.1 -6.6 -5.8
nitrogen source L-Alanine (N) N.D. -0.1 +0.3 -6.3 -6.0
carbon source succinate (C) N.D. -0.1 +0.3 -6.5 -5.7
carbon source L-Lactate (C) N.D. -0.7 +0.9 -6.0 -6.1
carbon source L-Glutamic (C) N.D. +0.3 -0.0 -6.3 -5.8
carbon source D-Glucose (C) N.D. -0.8 +0.3 -5.6 -5.7
stress D-Cycloserine 0.032 mg/ml N.D. +0.5 -0.2 -6.4 -5.7
nitrogen source D-Alanine (N) N.D. +0.0 +0.3 -6.6 -5.4
carbon source Fumarate (C) N.D. +0.5 +0.3 -6.2 -5.7
carbon source D-Lactate (C) N.D. -0.3 +0.6 -6.0 -5.4
carbon source D-Lactate (C) N.D. -0.4 +0.5 -5.6 -5.6
stress nitrite 2.5 mM N.D. +0.7 -0.1 -6.2 -5.4
nitrogen source D-Alanine (N) N.D. +0.5 +0.2 -6.4 -5.2
carbon source D-Fructose (C) N.D. +0.5 +0.1 -5.7 -5.8
carbon source D-Maltose (C) N.D. -0.0 +0.7 -5.8 -5.7
carbon source D-Maltose (C) N.D. -0.3 +0.8 -5.3 -6.0
nutrient L-Histidine N.D. +0.2 +0.5 -6.3 -5.1
carbon source D,L-Lactate (C) N.D. -0.4 +1.0 -5.8 -5.3
carbon source succinate (C) N.D. +0.5 +0.7 -6.0 -5.5
carbon source Glycolic Acid (C) N.D. -0.7 +1.1 -5.9 -4.6
nitrogen source Cytosine (N) N.D. +0.6 +0.7 -5.8 -5.3
stress Def Benzethonium chloride 0.008 mM N.D. +0.0 +1.1 -6.3 -4.7
nitrogen source nitrite (N) N.D. +1.1 +0.9 -5.8 -4.5
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