Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0618 and Psest_0619 are separated by 476 nucleotidesPsest_0619 and Psest_0620 are separated by 214 nucleotidesPsest_0620 and Psest_0621 are separated by 4 nucleotidesPsest_0621 and Psest_0622 overlap by 4 nucleotides Psest_0618: Psest_0618 - hypothetical protein, at 670,581 to 670,811 _0618 Psest_0619: Psest_0619 - cation diffusion facilitator family transporter, at 671,288 to 672,208 _0619 Psest_0620: Psest_0620 - Putative protein-S-isoprenylcysteine methyltransferase, at 672,423 to 672,884 _0620 Psest_0621: Psest_0621 - Protein-disulfide isomerase, at 672,889 to 673,569 _0621 Psest_0622: Psest_0622 - Disulfide bond formation protein DsbB, at 673,566 to 674,000 _0622
Group Condition Psest_0618 Psest_0619 Psest_0620 Psest_0621 Psest_0622
metal limitation Lactate-nitrite with YE; anaerobic; sample3 N.D. -0.4 -0.3 -0.3 -0.9
stress Def Carbenicillin 0.008 mg/ml N.D. -0.9 -0.3 -0.6 -0.1
stress Lactate-nitrate; anaerobic; copper stress sample3 N.D. -0.3 -0.3 -0.6 -0.7
stress Lactate-nitrate; anaerobic; dichromate stress sample1 N.D. -0.4 -0.2 -0.3 -0.9
stress Lactate-nitrate; anaerobic; dichromate stress sample2 N.D. -0.2 -0.4 -0.4 -0.7
stress nitrate 250 mM N.D. -1.0 -0.1 -0.5 -0.1
stress Lactate-nitrate; anaerobic sample1 N.D. -0.0 -0.3 -0.1 -1.2
metal limitation Lactate; aerobic; with copper, sample1 N.D. -0.3 -0.2 -0.4 -0.6
stress Nalidixic 0.00390625 mg/ml N.D. +0.1 +0.1 +0.2 -1.8
stress Thallium(I) acetate 0.08 mg/ml N.D. +0.0 -0.3 -0.3 -0.9
metal limitation Lactate-nitrite; anaerobic; sample2 N.D. -0.1 -0.3 -0.4 -0.7
stress Gentamicin 0.0016 mg/ml N.D. -0.9 -0.3 -0.3 +0.1
stress Lactate-nitrate; anaerobic; nickel stress sample1 N.D. -0.3 -0.3 -0.4 -0.4
metal limitation Lactate-nitrite; anaerobic; sample3 N.D. -0.4 -0.2 -0.4 -0.3
stress Lactate-nitrate; anaerobic; copper stress sample1 N.D. -0.4 -0.2 -0.2 -0.5
stress Def Thallium(I) acetate 0.125 mg/ml N.D. -0.2 -0.0 -0.1 -0.9
stress 1-ethyl-3-methylimidazolium acetate 40 mM N.D. -0.3 -0.1 -0.3 -0.6
stress Def Neomycin 0.0008 mg/ml N.D. -0.4 -0.3 +0.2 -0.5
anaerobic Nitrate/ lactate media with Nitrate 50mM N.D. +0.2 -0.2 -0.0 -0.9
stress Fusidic 0.016 mg/ml N.D. -0.7 -0.0 -0.3 +0.4
stress Lactate-nitrate; anaerobic; cobalt stress sample3 N.D. +0.4 -0.2 -0.4 -0.5
carbon source propionate (C) N.D. +0.4 +0.0 +0.0 -0.9
stress Doxycycline hyclate 0.0002 mg/ml N.D. -0.1 -0.1 +0.3 +1.0
RCH2 grown on a colony of Serratia N.D. +0.4 -0.2 +0.2 +0.7
RCH2 grown on a colony of N2F3 N.D. +0.2 +0.1 +0.1 +0.8
stress 2-Furfuraldehyde 0.05 vol% N.D. +0.2 +0.4 +0.0 +0.6
RCH2 grown on a colony of Serratia N.D. +0.6 +0.2 +0.1 +0.4
carbon source propionate (C) N.D. +0.9 +0.1 +0.0 +0.3
stress Cisplatin 0.003 mg/ml N.D. +0.5 +0.1 +0.2 +0.6
stress Polymyxin B sulfate 0.0001 mg/ml N.D. +0.2 +0.3 +0.4 +0.5
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