Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0615 and Psest_0616 are separated by 17 nucleotidesPsest_0616 and Psest_0618 are separated by 638 nucleotidesPsest_0618 and Psest_0619 are separated by 476 nucleotidesPsest_0619 and Psest_0620 are separated by 214 nucleotides Psest_0615: Psest_0615 - RND family efflux transporter, MFP subunit, at 665,408 to 666,754 _0615 Psest_0616: Psest_0616 - heavy metal efflux pump (cobalt-zinc-cadmium), at 666,772 to 669,942 _0616 Psest_0618: Psest_0618 - hypothetical protein, at 670,581 to 670,811 _0618 Psest_0619: Psest_0619 - cation diffusion facilitator family transporter, at 671,288 to 672,208 _0619 Psest_0620: Psest_0620 - Putative protein-S-isoprenylcysteine methyltransferase, at 672,423 to 672,884 _0620
Group Condition Psest_0615 Psest_0616 Psest_0618 Psest_0619 Psest_0620
stress Anaerobic 500 uM Zinc chloride sample1 -3.8 -3.7 N.D. -0.1 +0.0
stress Anaerobic 500 uM Zinc chloride sample3 -3.5 -3.8 N.D. -0.1 -0.0
stress Anaerobic 500 uM Zinc chloride sample2 -3.7 -3.7 N.D. -0.1 +0.0
stress Gentamicin 0.0016 mg/ml -1.0 -0.8 N.D. -0.9 -0.3
stress Def Carbenicillin 0.008 mg/ml -1.1 -0.8 N.D. -0.9 -0.3
stress Cephalothin 0.04 mg/ml -1.1 -0.8 N.D. -0.9 +0.0
stress Lactate-nitrate; anaerobic; cobalt stress sample2 -1.0 -1.1 N.D. -0.2 -0.1
stress nitrate 250 mM -0.5 -0.6 N.D. -1.0 -0.1
stress Lactate-nitrate; anaerobic; cobalt stress sample3 -1.3 -1.1 N.D. +0.4 -0.2
stress Lactate-nitrate; anaerobic; cobalt stress sample1 -0.8 -0.9 N.D. -0.2 -0.0
metal limitation Lactate-nitrite; anaerobic; sample3 -0.8 -0.6 N.D. -0.4 -0.2
carbon source RCH2 defined media -0.7 -0.5 N.D. -0.7 -0.0
stress Fusidic 0.016 mg/ml -0.7 -0.5 N.D. -0.7 -0.0
carbon source L-Lactate (C) -0.6 -0.5 N.D. -0.6 -0.0
metal limitation Lactate; aerobic; with copper, sample3 -0.7 -0.5 N.D. -0.2 -0.3
stress Lactate-nitrate; anaerobic; dichromate stress sample2 -0.5 -0.5 N.D. -0.2 -0.4
stress Def Polymyxin B sulfate 0.00008 mg/ml -0.6 -0.4 N.D. -0.6 -0.0
stress Lactate-nitrate; anaerobic; nickel stress sample2 -0.7 -0.4 N.D. -0.3 -0.3
stress Chlorate 75 mM -0.6 -0.3 N.D. -0.3 -0.4
stress Def Benzethonium chloride 0.008 mM -0.7 -0.4 N.D. -0.6 +0.2
stress Lactate-nitrate; anaerobic; nickel stress sample1 -0.6 -0.5 N.D. -0.3 -0.3
metal limitation Lactate-nitrite with YE; anaerobic; sample3 -0.5 -0.3 N.D. -0.4 -0.3
stress Lactate-nitrate; anaerobic; nickel stress sample3 -0.4 -0.5 N.D. -0.2 -0.4
stress Lactate-nitrate; anaerobic; copper stress sample3 -0.6 -0.3 N.D. -0.3 -0.3
metal limitation Lactate; aerobic; with copper, sample1 -0.6 -0.4 N.D. -0.3 -0.2
metal limitation Lactate-nitrite; anaerobic; sample2 -0.6 -0.5 N.D. -0.1 -0.3
stress Lactate-nitrate; anaerobic; copper stress sample1 -0.4 -0.3 N.D. -0.4 -0.2
metal limitation Lactate; aerobic; with copper, sample2 -0.4 -0.5 N.D. -0.3 -0.2
stress Def Benzalkonium Chloride 0.002 mg/ml -0.5 -0.4 N.D. -0.6 +0.3
stress Zinc 0.12 mM -0.7 -0.8 N.D. +0.2 +0.0
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