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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0602 and Psest_0603 are separated by 116 nucleotides
Psest_0603 and Psest_0606 are separated by 1217 nucleotides
Psest_0606 and Psest_0607 are separated by 86 nucleotides
Psest_0607 and Psest_0608 are separated by 92 nucleotides
Psest_0602: Psest_0602 - hypothetical protein, at 654,515 to 655,561
_0602
Psest_0603: Psest_0603 - hypothetical protein, at 655,678 to 656,121
_0603
Psest_0606: Psest_0606 - Predicted hydrolase (HAD superfamily), at 657,339 to 657,971
_0606
Psest_0607: Psest_0607 - Co/Zn/Cd efflux system component, at 658,058 to 658,948
_0607
Psest_0608: Psest_0608 - Cd(II)/Pb(II)-responsive transcriptional regulator, at 659,041 to 659,445
_0608
Group
Condition
Psest
_0602
Psest
_0603
Psest
_0606
Psest
_0607
Psest
_0608
stress
Def Carbenicillin 0.008 mg/ml
-1.0
-0.2
-0.3
-0.1
-1.1
metal limitation
Lactate-nitrite; anaerobic; sample3
-0.6
-0.4
-0.4
-0.3
-0.9
stress
Chlorate 75 mM
-0.5
-0.4
-0.4
-0.0
-1.3
metal limitation
Lactate; aerobic; with copper, sample3
-0.4
-0.5
-0.5
-0.3
-0.4
metal limitation
Lactate-nitrite with YE; anaerobic; sample3
-0.2
-0.5
-0.4
-0.4
-0.7
stress
Gentamicin 0.0016 mg/ml
-0.8
-0.1
-0.1
-0.4
-0.7
stress
Lactate-nitrate; anaerobic; nickel stress sample3
+0.1
-0.4
-0.4
-0.4
-0.9
stress
Cephalothin 0.04 mg/ml
-1.2
-0.1
+0.1
+0.1
-0.9
stress
Lactate-nitrate; anaerobic; dichromate stress sample2
-0.4
-0.3
-0.4
-0.4
-0.6
stress
Lactate-nitrate; anaerobic sample2
-0.2
-0.4
-0.4
-0.2
-0.9
stress
nitrate 250 mM
-0.8
-0.2
-0.2
-0.1
-0.6
stress
Lactate-nitrate; anaerobic; copper stress sample3
-0.1
-0.5
-0.4
-0.2
-0.8
metal limitation
Lactate-nitrite; anaerobic; sample1
-0.1
-0.5
-0.4
-0.1
-0.8
temperature
LB 30C timecourse1 timepoint 3
-0.1
-0.5
-0.2
-0.5
-0.6
stress
Lactate-nitrate; anaerobic; copper stress sample1
-0.3
-0.2
-0.4
-0.3
-0.7
metal limitation
Lactate-nitrite; anaerobic; sample2
-0.3
-0.5
-0.4
-0.2
-0.5
metal limitation
Lactate; aerobic; with copper, sample1
-0.4
-0.4
-0.4
-0.3
-0.4
stress
Lactate-nitrate; anaerobic; nickel stress sample2
+0.1
-0.6
-0.4
-0.3
-0.7
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample3
-0.5
-0.1
-0.3
-0.4
-0.5
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample1
-0.0
-0.4
-0.5
-0.5
-0.3
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample2
-0.4
-0.4
-0.4
-0.3
-0.4
RCH2 grown on a colony of N2F3
-0.5
+0.1
-0.7
-0.3
-0.3
stress
Lactate-nitrate; anaerobic; cobalt stress sample1
+0.1
-0.3
-0.6
-0.5
-0.3
stress
Fusidic 0.016 mg/ml
-0.9
+0.1
+0.2
-0.3
-0.4
RCH2 grown on a colony of ecoli
+0.3
-0.2
-0.6
-0.1
-0.6
carbon source
RCH2 defined media
-0.6
+0.2
+0.1
-0.1
-0.8
stress
Def Benzethonium chloride 0.008 mM
-0.9
+0.3
+0.1
+0.1
-0.5
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.5
+0.3
+0.1
+0.4
-0.7
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.3
+0.4
+0.1
+0.4
-0.9
RCH2 grown on a colony of N2A2
+0.5
+0.4
-0.2
+0.4
-0.3
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