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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0592 and Psest_0593 are separated by 23 nucleotides
Psest_0593 and Psest_0594 are separated by 32 nucleotides
Psest_0594 and Psest_0595 are separated by 142 nucleotides
Psest_0595 and Psest_0596 overlap by 4 nucleotides
Psest_0592: Psest_0592 - hypothetical protein, at 643,575 to 643,805
_0592
Psest_0593: Psest_0593 - Protein of unknown function (DUF2933)., at 643,829 to 644,086
_0593
Psest_0594: Psest_0594 - hypothetical protein, at 644,119 to 644,436
_0594
Psest_0595: Psest_0595 - Uncharacterized conserved protein, at 644,579 to 644,935
_0595
Psest_0596: Psest_0596 - heavy metal efflux pump (cobalt-zinc-cadmium), at 644,932 to 648,096
_0596
Group
Condition
Psest
_0592
Psest
_0593
Psest
_0594
Psest
_0595
Psest
_0596
stress
Lactate-nitrate; anaerobic; copper stress sample3
-0.7
-0.8
-0.6
+0.0
-1.1
stress
Furfuryl Alcohol 0.05 vol%
-0.1
+0.5
-1.1
-2.1
-0.4
stress
Lactate-nitrate; anaerobic; copper stress sample2
-0.6
-0.6
-0.4
-0.3
-0.5
stress
Lactate-nitrate; anaerobic; copper stress sample1
+0.2
-0.7
-0.5
-0.4
-0.9
stress
syringaldehyde 3 mM
-0.8
-0.3
-0.6
-0.4
-0.0
stress
Phosphomycin 0.012 mg/ml
-1.0
+0.2
-0.8
-0.4
+0.0
stress
Furfuryl Alcohol 0.3 vol%
-0.9
+0.4
-0.4
-0.9
+0.0
RCH2 grown on a colony of 8R2A
-0.7
-0.7
-0.2
+0.3
-0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-1.4
-0.0
-0.3
+0.3
-0.1
RCH2 grown on a colony of Serratia
-1.1
+0.5
-0.3
-0.5
-0.1
RCH2 grown on a colony of N2A2
-1.3
-0.5
+0.2
+0.6
-0.0
stress
Aluminum chloride 0.3 mM
-0.9
+0.2
-0.5
+0.7
+0.0
nitrogen source
L-Glutamic (N)
-1.4
+0.3
-0.2
+0.7
+0.2
stress
Cobalt chloride 0.06 mM
-0.5
+0.7
+0.2
-0.6
+0.1
stress
Gentamicin 0.0016 mg/ml
-0.8
-0.3
+0.4
+0.6
+0.1
stress
Cobalt chloride 0.08 mM
-1.0
+0.3
-0.2
+0.8
+0.1
stress
Vanillin 2 mM
-1.3
+0.5
+0.4
+0.5
-0.1
stress
Def Carbenicillin 0.008 mg/ml
-1.0
-0.1
+0.4
+1.3
-0.1
stress
Paraquat dichloride 0.015 mg/ml
+0.8
+0.8
-0.3
-0.3
-0.2
stress
Cephalothin 0.04 mg/ml
-0.1
-0.5
+0.6
+1.0
+0.1
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.5
-0.5
+0.8
+1.0
+0.3
nitrogen source
L-Isoleucine (N)
+1.6
+0.2
-0.0
-0.3
-0.1
carbon source
L-tyrosine (C)
+0.3
+0.9
+0.6
-0.8
+0.4
carbon source
RCH2 defined media
-0.3
-0.2
+0.6
+1.2
+0.1
stress
Benzalkonium Chloride 0.002 mg/ml
-0.6
+0.2
+0.7
+0.9
+0.3
nitrogen source
nitrite (N)
-0.2
-0.1
+0.6
+1.2
+0.1
nitrogen source
L-Isoleucine (N)
+0.9
+0.4
+0.2
+0.1
+0.4
stress
Def Benzethonium chloride 0.008 mM
-0.1
+0.1
+0.6
+1.3
+0.3
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.8
+0.2
+0.5
+0.7
-0.0
stress
Def 2-Furfuraldehyde 0.032 vol%
+0.4
+0.3
+0.1
+1.3
+0.3
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