Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0560 and Psest_0561 are separated by 131 nucleotidesPsest_0561 and Psest_0562 are separated by 204 nucleotidesPsest_0562 and Psest_0563 are separated by 105 nucleotidesPsest_0563 and Psest_0564 are separated by 166 nucleotides Psest_0560: Psest_0560 - Urease (EC 3.5.1.5) (from data), at 613,777 to 614,079 _0560 Psest_0561: Psest_0561 - Urease accessory protein UreH, at 614,211 to 615,044 _0561 Psest_0562: Psest_0562 - magnesium-translocating P-type ATPase, at 615,249 to 618,797 _0562 Psest_0563: Psest_0563 - urea ABC transporter, ATP-binding protein UrtE, at 618,903 to 619,601 _0563 Psest_0564: Psest_0564 - urea ABC transporter, ATP-binding protein UrtD, at 619,768 to 620,619 _0564
Group Condition Psest_0560 Psest_0561 Psest_0562 Psest_0563 Psest_0564
nitrogen source Parabanic Acid (N) -3.7 -4.4 +0.2 -2.2 N.D.
nitrogen source Parabanic Acid (N) -3.8 -4.2 -0.0 -1.9 N.D.
nitrogen source Parabanic Acid (N) -4.4 -3.0 +0.4 -1.9 N.D.
nitrogen source Adenine (N) -1.3 -1.6 +0.1 -0.2 N.D.
nitrogen source Adenine (N) -1.5 -1.5 +0.1 -0.1 N.D.
stress Polymyxin B sulfate 0.0001 mg/ml -0.6 -1.0 -1.2 -0.1 N.D.
nitrogen source Urea (N) -1.1 -0.9 +0.0 +0.3 N.D.
nitrogen source Adenine (N) -1.0 -1.0 +0.1 +0.1 N.D.
nitrogen source Urea (N) -1.0 -1.0 +0.2 +0.3 N.D.
stress sodium fluoride 6.25 mM -0.3 -0.4 -0.8 +0.2 N.D.
carbon source L-tyrosine (C) -0.6 -0.4 +0.2 -0.4 N.D.
RCH2 grown on a colony of N2C3 +0.2 -0.6 +0.2 -0.9 N.D.
stress Carbenicillin 0.0065 mg/ml -0.3 +0.1 +0.3 -0.9 N.D.
stress Nalidixic 0.00390625 mg/ml -0.2 -0.4 +0.5 -0.6 N.D.
stress nitrate 250 mM -0.8 -0.2 +0.3 +0.3 N.D.
stress A22 0.002 mg/ml +0.1 +0.6 +0.1 -0.9 N.D.
RCH2 grown on a colony of Serratia +0.3 +0.3 +0.3 -0.9 N.D.
stress nitrate 200 mM -0.5 +0.6 -0.1 +0.4 N.D.
stress syringaldehyde 3 mM -0.3 -0.1 +0.3 +0.8 N.D.
stress Choline chloride 90 mM -0.5 +0.4 +0.3 +0.6 N.D.
RCH2 grown on a colony of N2A2 +0.3 -0.2 -0.1 +0.9 N.D.
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample2 +0.5 -0.0 +0.3 +0.7 N.D.
stress Lactate-nitrate; anaerobic; nickel stress sample2 +0.2 +0.3 +0.2 +0.8 N.D.
temperature LB 30C timecourse2 timepoint 2 +0.2 +0.3 +0.4 +0.7 N.D.
stress Def Carbenicillin 0.02 mg/ml +0.2 +0.4 +0.7 +0.5 N.D.
temperature LB 30C timecourse1 timepoint 2 +0.7 +0.4 +0.6 +0.2 N.D.
temperature Glucose defined 30C timecourse1 timepoint 3 +0.3 +0.5 +0.4 +0.6 N.D.
carbon source L-Proline (C) +0.4 +0.9 +0.3 +0.4 N.D.
lb LB +0.4 +0.6 +0.7 +0.6 N.D.
stress Def Carbenicillin 0.008 mg/ml +0.2 +0.6 +1.2 +0.9 N.D.
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