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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0544 and Psest_0545 are separated by 76 nucleotides
Psest_0545 and Psest_0546 overlap by 4 nucleotides
Psest_0546 and Psest_0547 overlap by 4 nucleotides
Psest_0547 and Psest_0548 overlap by 4 nucleotides
Psest_0544: Psest_0544 - Hydrogenase/urease accessory protein, at 599,707 to 600,279
_0544
Psest_0545: Psest_0545 - urease accessory protein UreG, at 600,356 to 600,970
_0545
Psest_0546: Psest_0546 - hypothetical protein, at 600,967 to 601,632
_0546
Psest_0547: Psest_0547 - Urease accessory protein UreF, at 601,629 to 602,321
_0547
Psest_0548: Psest_0548 - Urease accessory protein UreE, at 602,318 to 602,818
_0548
Group
Condition
Psest
_0544
Psest
_0545
Psest
_0546
Psest
_0547
Psest
_0548
nitrogen source
Parabanic Acid (N)
N.D.
-4.2
-3.0
-4.1
-4.1
nitrogen source
Parabanic Acid (N)
N.D.
-4.6
-1.8
-3.9
-3.7
nitrogen source
Parabanic Acid (N)
N.D.
-2.8
-1.6
-3.9
-3.2
nitrogen source
Adenine (N)
N.D.
-1.4
-1.3
-1.5
-1.8
nitrogen source
Adenine (N)
N.D.
-1.8
-1.0
-1.6
-1.5
nitrogen source
Adenine (N)
N.D.
-1.1
-1.0
-1.3
-1.3
nitrogen source
Urea (N)
N.D.
-1.3
-0.7
-1.3
-0.9
nitrogen source
Urea (N)
N.D.
-1.2
-0.7
-1.0
-1.1
stress
Nalidixic 0.00390625 mg/ml
N.D.
-0.1
-1.0
-0.4
-0.8
stress
Paraquat dichloride 0.015 mg/ml
N.D.
-0.0
-0.1
-2.0
-0.0
RCH2 grown on a colony of N2C3
N.D.
+0.1
-0.3
-1.0
-0.9
stress
Phosphomycin 0.012 mg/ml
N.D.
+0.1
+0.2
-1.9
-0.3
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
N.D.
-0.1
-0.2
-1.3
-0.3
vitamin
With vitamins t1
N.D.
+0.1
-0.8
-1.0
-0.2
stress
Bacitracin 0.25 mg/ml
N.D.
-0.2
-0.2
-1.5
+0.1
RCH2 grown on a colony of N2F3
N.D.
-0.2
+0.5
-1.2
-0.3
stress
Cisplatin 0.0016 mg/ml
N.D.
-0.3
+0.2
-1.4
+0.3
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
N.D.
-0.0
+0.6
-1.3
+0.7
RCH2 grown on a colony of N2A2
N.D.
-0.6
+0.6
-0.7
+0.6
stress
Doxycycline hyclate 0.0002 mg/ml
N.D.
-0.2
+0.9
-0.5
+0.5
stress
Def 2-Furfuraldehyde 0.032 vol%
N.D.
+0.3
+0.9
+0.4
-0.7
stress
Def Polymyxin B sulfate 0.0001 mg/ml
N.D.
+0.5
+0.6
+0.7
+0.2
stress
Def Benzethonium chloride 0.008 mM
N.D.
+0.5
+0.7
+1.0
+0.1
nitrogen source
nitrite (N)
N.D.
-0.4
+1.5
+0.9
+0.4
stress
Def Polymyxin B sulfate 0.00008 mg/ml
N.D.
+0.7
+0.7
+0.9
+0.3
carbon source
RCH2 defined media
N.D.
+0.7
+0.9
+0.7
+0.4
stress
Fusidic 0.016 mg/ml
N.D.
+0.4
+0.8
+1.1
+0.7
stress
Chlorate 75 mM
N.D.
+0.3
+2.1
+0.8
-0.0
stress
Cephalothin 0.04 mg/ml
N.D.
+0.6
+1.0
+1.0
+0.8
stress
Def Carbenicillin 0.008 mg/ml
N.D.
+0.8
+1.3
+1.0
+0.2
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