Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0535 and Psest_0536 are separated by 55 nucleotidesPsest_0536 and Psest_0537 are separated by 14 nucleotidesPsest_0537 and Psest_0538 are separated by 222 nucleotidesPsest_0538 and Psest_0539 are separated by 130 nucleotides Psest_0535: Psest_0535 - glutamate-1-semialdehyde-2,1-aminomutase, at 587,985 to 589,268 _0535 Psest_0536: Psest_0536 - thiamine-phosphate pyrophosphorylase, at 589,324 to 589,965 _0536 Psest_0537: Psest_0537 - Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase, at 589,980 to 590,774 _0537 Psest_0538: Psest_0538 - Signal transduction histidine kinase, at 590,997 to 592,997 _0538 Psest_0539: Psest_0539 - Acyl-CoA dehydrogenases, at 593,128 to 594,774 _0539
Group Condition Psest_0535 Psest_0536 Psest_0537 Psest_0538 Psest_0539
stress Def Benzethonium chloride 0.008 mM N.D. -5.0 -5.1 -1.9 +0.2
vitamin No vitamins t2 N.D. -4.0 -4.1 -0.6 -0.1
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. -3.1 -4.1 -1.1 +0.2
RCH2 grown on a colony of ecoli N.D. -3.1 -3.7 -0.6 -0.1
vitamin No vitamins t1 N.D. -2.4 -3.3 -0.6 -0.2
RCH2 grown on a colony of Serratia N.D. -1.4 -2.6 -3.0 +0.6
RCH2 grown on a colony of ecoli N.D. -3.4 -1.8 -0.5 +0.0
stress Def methylglyoxal 0.01 vol% N.D. -1.8 -4.9 +1.0 +0.2
stress Def Tetracycline 0.0004 mg/ml N.D. -2.1 -2.5 -0.9 +0.1
carbon source L-tyrosine (C) N.D. -4.2 -4.9 +4.1 +0.1
stress Def Fusidic 0.032 mg/ml N.D. -2.3 -3.2 +0.6 +0.1
carbon source L-tyrosine (C) N.D. -3.7 -5.1 +4.1 +0.2
RCH2 grown on a colony of 8R2A N.D. -2.7 -3.0 +1.8 +0.3
carbon source RCH2 defined media N.D. -2.4 -2.7 +1.9 +0.4
stress Def 2-Furfuraldehyde 0.032 vol% N.D. -2.9 -3.2 +3.7 +0.8
stress Def Polymyxin B sulfate 0.0001 mg/ml N.D. -3.0 -1.9 +2.8 +0.6
stress Def Cisplatin 0.0002 mg/ml N.D. -2.4 -1.3 +2.3 +0.1
stress Def Carbenicillin 0.008 mg/ml N.D. -1.9 -3.9 +3.9 +0.7
stress Def Chloride 400 mM N.D. -1.6 -2.1 +2.7 +0.1
temperature LB 26C sample1 N.D. +0.8 -3.4 +1.8 +0.1
stress Def Polymyxin B sulfate 0.00008 mg/ml N.D. -1.8 -1.6 +2.5 +0.5
carbon source RCH2 defined media N.D. -1.6 -1.4 +2.0 +0.5
radiation Ionizing radiation, 0 Gy N.D. -2.0 -1.4 +3.0 +0.1
stress Def Carbenicillin 0.02 mg/ml N.D. +0.1 -2.8 +2.4 +0.2
radiation Ionizing radiation, 319.06 Gy, N.D. -3.1 -0.9 +4.6 +0.1
radiation Ionizing radiation, 319.06 Gy, N.D. -2.7 -1.0 +4.5 +0.3
stress Cephalothin 0.04 mg/ml N.D. +0.9 -1.6 +2.5 +0.9
nitrogen source nitrite (N) N.D. +1.0 -0.9 +3.2 +0.8
carbon source butyrate (C) N.D. +0.2 -0.9 +4.7 +0.8
nitrogen source nitrite (N) N.D. +0.8 -0.6 +3.6 +1.0
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