Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_0527 and Psest_0528 are separated by 100 nucleotidesPsest_0528 and Psest_0529 are separated by 117 nucleotidesPsest_0529 and Psest_0530 are separated by 9 nucleotidesPsest_0530 and Psest_0531 overlap by 8 nucleotides Psest_0527: Psest_0527 - Uncharacterized conserved protein, at 580,329 to 581,102 _0527 Psest_0528: Psest_0528 - apolipoprotein N-acyltransferase, at 581,203 to 582,717 _0528 Psest_0529: Psest_0529 - Putative Mg2+ and Co2+ transporter CorC, at 582,835 to 583,677 _0529 Psest_0530: Psest_0530 - metalloprotein, YbeY/UPF0054 family, at 583,687 to 584,169 _0530 Psest_0531: Psest_0531 - Phosphate starvation-inducible protein PhoH, predicted ATPase, at 584,162 to 585,328 _0531
Group Condition Psest_0527 Psest_0528 Psest_0529 Psest_0530 Psest_0531
stress Anaerobic 500 uM Zinc chloride sample2 +0.1 N.D. -5.2 N.D. +0.1
stress Anaerobic 500 uM Zinc chloride sample3 +0.2 N.D. -4.8 N.D. +0.2
RCH2 grown on a colony of Serratia -0.7 N.D. -3.0 N.D. -0.5
stress Anaerobic 500 uM Zinc chloride sample1 +0.1 N.D. -4.5 N.D. +0.3
metal limitation Lactate; aerobic; with copper, sample3 +0.3 N.D. -3.2 N.D. -0.2
stress Def Chloride 400 mM -0.5 N.D. -1.4 N.D. -0.9
RCH2 grown on a colony of Serratia +0.2 N.D. -2.4 N.D. -0.6
metal limitation Lactate; aerobic; with copper, sample2 +0.2 N.D. -2.8 N.D. -0.0
metal limitation Lactate-nitrite; anaerobic; with copper; sample1 +0.1 N.D. -2.3 N.D. -0.3
metal limitation Lactate; aerobic; sample2 +0.2 N.D. -2.7 N.D. -0.0
metal limitation Lactate; aerobic; sample3 +0.3 N.D. -2.4 N.D. -0.0
stress Def 2-Furfuraldehyde 0.032 vol% +0.2 N.D. -1.7 N.D. -0.6
carbon source Anaerobic, Glucose Nitrate sample2 +0.2 N.D. -2.0 N.D. -0.2
metal limitation Lactate-nitrite; anaerobic; sample3 +0.3 N.D. -1.8 N.D. -0.3
stress Lactate-nitrate; anaerobic; copper stress sample3 +0.6 N.D. -1.8 N.D. +0.1
stress Nickel (II) chloride 0.8 mM -0.4 N.D. +2.1 N.D. -0.5
stress Nickel (II) chloride 0.9 mM -0.0 N.D. +2.2 N.D. -0.6
stress Nickel (II) chloride 0.8 mM -0.2 N.D. +2.2 N.D. -0.3
stress Nickel (II) chloride 0.8 mM +0.0 N.D. +2.1 N.D. -0.5
carbon source propionate (C) -0.3 N.D. +2.2 N.D. +0.5
stress Cobalt chloride 0.05 mM +0.0 N.D. +2.5 N.D. -0.0
stress nitrate 200 mM -0.0 N.D. +2.0 N.D. +0.6
stress Choline chloride 90 mM +0.3 N.D. +1.0 N.D. +1.3
stress Nickel (II) chloride 0.9 mM -0.1 N.D. +3.1 N.D. -0.2
stress Cisplatin 0.003 mg/ml +0.0 N.D. +1.8 N.D. +1.0
stress Cisplatin 0.003 mg/ml -0.1 N.D. +2.0 N.D. +1.0
stress Cobalt chloride 0.05 mM +0.1 N.D. +2.8 N.D. +0.0
stress Cobalt chloride 0.06 mM -0.1 N.D. +2.8 N.D. +0.4
stress Nickel (II) chloride 1 mM +0.0 N.D. +3.6 N.D. -0.2
stress Nickel (II) chloride 1 mM -0.4 N.D. +4.4 N.D. -0.1
remove
Psest_0527
plot		 remove
Psest_0528
plot		 remove
Psest_0529		 remove
Psest_0530
plot		 remove
Psest_0531
plot