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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0046 and Psest_0047 are separated by 284 nucleotides
Psest_0047 and Psest_0048 are separated by 407 nucleotides
Psest_0048 and Psest_0049 are separated by 186 nucleotides
Psest_0049 and Psest_0050 are separated by 155 nucleotides
Psest_0046: Psest_0046 - Uncharacterized protein conserved in bacteria, at 48,555 to 49,013
_0046
Psest_0047: Psest_0047 - Predicted esterase of the alpha-beta hydrolase superfamily, at 49,298 to 50,521
_0047
Psest_0048: Psest_0048 - ABC-type multidrug transport system, ATPase and permease components, at 50,929 to 52,764
_0048
Psest_0049: Psest_0049 - Uncharacterized conserved protein, at 52,951 to 53,556
_0049
Psest_0050: Psest_0050 - Predicted acetyltransferase, at 53,712 to 53,993
_0050
Group
Condition
Psest
_0046
Psest
_0047
Psest
_0048
Psest
_0049
Psest
_0050
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.1
+0.3
-0.7
-0.4
-1.7
nitrogen source
L-Isoleucine (N)
-0.8
-0.3
-0.5
-0.3
-0.5
stress
Furfuryl Alcohol 0.05 vol%
+0.1
-1.0
-0.5
+0.1
-0.7
stress
A22 0.005 mg/ml
-0.4
-0.2
-0.4
-0.2
-0.7
RCH2 grown on a colony of 8R2A
-0.4
+0.5
-0.3
-0.0
-1.5
RCH2 grown on a colony of Serratia
-0.9
-0.4
-0.3
-0.1
-0.0
carbon source
propionate (C)
+0.1
+0.5
-1.4
-0.1
-0.2
stress
Lactate-nitrate; anaerobic; copper stress sample3
+0.3
-0.5
-0.4
-0.1
-0.4
RCH2 grown on a colony of ecoli
+0.2
+0.2
+0.3
+0.3
-1.9
anaerobic
Nitrate/ lactate media with Nitrate 20mM
-0.2
+0.4
-0.4
-0.2
-0.6
carbon source
propionate (C)
-0.2
-0.3
-0.7
+0.1
+0.4
anaerobic
Nitrate/ lactate media with Nitrate 250mM
-0.3
+0.4
-0.4
-0.1
-0.5
RCH2 grown on a colony of N2F3
-1.1
-0.7
+0.4
+0.2
+0.5
stress
Def Chlorate 40 mM
+0.3
-0.4
+0.3
+0.1
-1.0
stress
Cobalt chloride 0.08 mM
+0.4
+0.2
-0.4
+0.1
-0.8
stress
acetate 80 mM
-0.1
+0.1
+0.5
-0.1
-0.9
stress
Zinc 0.12 mM
-0.1
-0.3
+0.7
-0.1
-0.5
stress
Doxycycline hyclate 0.0002 mg/ml
+0.5
+0.5
-0.2
+0.2
-1.1
stress
A22 0.005 mg/ml
+0.3
+0.5
+0.3
+0.1
-0.9
carbon source
L-tyrosine (C)
-0.4
-0.9
+0.8
-0.1
+0.9
stress
Carbenicillin 0.008 mg/ml
+0.4
-0.6
+0.9
+0.0
-0.3
anaerobic
Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten
-0.2
+0.6
-0.4
-0.0
+0.6
stress
Benzethonium chloride 0.0125 mM
-0.4
+0.6
+0.2
-0.0
+0.5
stress
Choline chloride 90 mM
+0.5
-0.3
+0.5
+0.1
+0.6
stress
Choline chloride 90 mM
+0.6
+0.6
+0.3
-0.2
+0.2
RCH2 grown on a colony of N2C3
-0.3
-0.0
+0.7
+0.1
+1.0
stress
Benzalkonium Chloride 0.002 mg/ml
+0.2
+0.3
+0.6
+0.2
+0.3
stress
Def Cephalothin 0.04 mg/ml
+0.5
+0.1
+0.3
+0.2
+0.6
stress
Def Carbenicillin 0.02 mg/ml
+0.8
+0.5
+0.6
+0.5
-0.4
stress
Def Carbenicillin 0.008 mg/ml
+0.6
+0.5
+0.6
+0.1
+0.5
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