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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0480 and Psest_0481 are separated by 153 nucleotides
Psest_0481 and Psest_0482 are separated by 166 nucleotides
Psest_0482 and Psest_0483 are separated by 63 nucleotides
Psest_0483 and Psest_0484 overlap by 4 nucleotides
Psest_0480: Psest_0480 - Uncharacterized protein conserved in bacteria, at 530,251 to 530,697
_0480
Psest_0481: Psest_0481 - Predicted phosphohydrolases, at 530,851 to 531,666
_0481
Psest_0482: Psest_0482 - yqiA-like hydrolase, affects the cell envelope
(from data)
, at 531,833 to 532,438
_0482
Psest_0483: Psest_0483 - DNA topoisomerase IV, B subunit, proteobacterial, at 532,502 to 534,481
_0483
Psest_0484: Psest_0484 - hypothetical protein, at 534,478 to 535,461
_0484
Group
Condition
Psest
_0480
Psest
_0481
Psest
_0482
Psest
_0483
Psest
_0484
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.8
N.D.
-2.0
N.D.
-0.8
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.3
N.D.
-0.1
N.D.
-2.1
stress
Cephalothin 0.04 mg/ml
-0.9
N.D.
-0.7
N.D.
-0.7
stress
Benzalkonium Chloride 0.002 mg/ml
-0.4
N.D.
-1.8
N.D.
+0.2
stress
Def Carbenicillin 0.008 mg/ml
-0.8
N.D.
-2.3
N.D.
+1.1
nitrogen source
L-Glutamic (N)
-0.1
N.D.
-0.6
N.D.
-1.2
stress
Def Polymyxin B sulfate 0.0001 mg/ml
-0.6
N.D.
-0.6
N.D.
-0.6
carbon source
RCH2 defined media
-0.4
N.D.
+0.2
N.D.
-1.5
RCH2 grown on a colony of N2F3
-0.2
N.D.
-0.1
N.D.
-1.4
stress
D-Cycloserine 0.032 mg/ml
-0.2
N.D.
-0.3
N.D.
-1.2
anaerobic
nitrate reduction - anaerobic
-0.4
N.D.
-0.0
N.D.
-1.3
stress
Nalidixic 0.00390625 mg/ml
-0.7
N.D.
-1.2
N.D.
+0.2
stress
Doxycycline hyclate 0.0002 mg/ml
-0.3
N.D.
-2.2
N.D.
+1.0
stress
Phosphomycin 0.012 mg/ml
+0.1
N.D.
-1.7
N.D.
+0.2
stress
Phosphomycin 0.012 mg/ml
-0.0
N.D.
-1.5
N.D.
+0.4
stress
Paraquat dichloride 0.015 mg/ml
-0.4
N.D.
-1.0
N.D.
+0.3
carbon source
butyrate (C)
-0.6
N.D.
+0.8
N.D.
-1.1
stress
Def Chlorate 40 mM
-0.4
N.D.
+0.6
N.D.
-1.0
stress
nitrate 250 mM
-1.0
N.D.
+0.9
N.D.
-0.6
stress
Carbenicillin 0.008 mg/ml
+0.0
N.D.
-1.7
N.D.
+1.1
stress
Bacitracin 0.25 mg/ml
+0.1
N.D.
-1.3
N.D.
+1.3
stress
Bacitracin 0.25 mg/ml
+0.2
N.D.
-1.8
N.D.
+1.8
stress
Carbenicillin 0.008 mg/ml
-0.0
N.D.
-0.8
N.D.
+1.7
stress
Def Neomycin 0.0008 mg/ml
-0.2
N.D.
+0.7
N.D.
+0.9
carbon source
L-tyrosine (C)
-0.4
N.D.
+1.4
N.D.
+0.7
stress
D-Cycloserine 0.032 mg/ml
-0.1
N.D.
+1.1
N.D.
+0.8
stress
Neomycin 0.004 mg/ml
+0.1
N.D.
+1.7
N.D.
+0.2
stress
L-Lysine 200 mM
-0.0
N.D.
+1.5
N.D.
+0.5
carbon source
L-tyrosine (C)
-0.1
N.D.
+1.6
N.D.
+0.9
stress
Neomycin 0.004 mg/ml
-0.1
N.D.
+2.2
N.D.
+1.1
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