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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0474 and Psest_0475 are separated by 112 nucleotides
Psest_0475 and Psest_0476 are separated by 196 nucleotides
Psest_0476 and Psest_0477 are separated by 382 nucleotides
Psest_0477 and Psest_0478 are separated by 57 nucleotides
Psest_0474: Psest_0474 - Membrane transporters of cations and cationic drugs, at 522,931 to 523,329
_0474
Psest_0475: Psest_0475 - 3-deoxy-D-manno-octulosonic-acid transferase, at 523,442 to 524,710
_0475
Psest_0476: Psest_0476 - type I secretion outer membrane protein, TolC family, at 524,907 to 526,361
_0476
Psest_0477: Psest_0477 - thiamine biosynthesis protein ThiC, at 526,744 to 528,624
_0477
Psest_0478: Psest_0478 - Protein of unknown function (DUF3298)., at 528,682 to 529,419
_0478
Group
Condition
Psest
_0474
Psest
_0475
Psest
_0476
Psest
_0477
Psest
_0478
stress
Def Benzethonium chloride 0.008 mM
-0.4
N.D.
-6.9
-4.4
+0.6
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.1
N.D.
-4.4
-3.2
+0.6
stress
Def Doxycycline hyclate 0.0002 mg/ml
-0.1
N.D.
-2.3
-3.0
+0.1
stress
Benzethonium chloride 0.0125 mM
+0.0
N.D.
-5.1
-0.1
+0.0
stress
Benzethonium chloride 0.0125 mM
+0.2
N.D.
-4.6
+0.0
-0.0
stress
Def Nalidixic 0.001 mg/ml
-0.2
N.D.
-2.2
-1.6
+0.1
carbon source
L-tyrosine (C)
-0.2
N.D.
+0.4
-3.9
-0.1
RCH2 grown on a colony of Serratia
+0.1
N.D.
-3.2
-0.3
-0.1
stress
Def Neomycin 0.0008 mg/ml
-0.1
N.D.
-0.2
-3.0
-0.1
stress
Def Polymyxin B sulfate 0.0001 mg/ml
-0.0
N.D.
-0.3
-3.2
+0.1
stress
Def Lomefloxacin 0.00004 mM
+0.3
N.D.
-2.8
-1.1
+0.3
stress
Benzalkonium Chloride 0.002 mg/ml
-0.2
N.D.
-3.3
+0.3
-0.1
stress
Def Tetracycline 0.0004 mg/ml
+0.0
N.D.
-1.7
-1.5
-0.1
vitamin
No vitamins t2
+0.1
N.D.
+0.0
-3.2
-0.1
carbon source
L-tyrosine (C)
+0.3
N.D.
+0.3
-4.0
+0.3
stress
Def Chloride 400 mM
-0.4
N.D.
-0.3
-2.5
+0.1
stress
L-Lysine 200 mM
+0.3
N.D.
+0.1
+0.2
-3.6
stress
Benzethonium chloride 0.01 mM
-0.0
N.D.
-2.7
+0.1
-0.3
stress
L-Lysine 200 mM
-0.1
N.D.
+0.2
-0.1
-3.0
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.6
N.D.
-1.3
-0.3
-0.7
stress
Benzethonium chloride 0.01 mM
+0.6
N.D.
-3.3
+0.0
-0.1
stress
Def Cisplatin 0.0002 mg/ml
-0.2
N.D.
-0.2
-2.4
+0.1
stress
Def 2-Furfuraldehyde 0.032 vol%
+0.4
N.D.
+0.5
-3.6
+0.2
RCH2 grown on a colony of Serratia
-0.1
N.D.
-2.9
+0.7
+0.1
stress
Def Vancomycin 0.008 mg/ml
-0.1
N.D.
+0.2
-2.4
+0.2
RCH2 grown on a colony of 8R2A
-0.1
N.D.
+0.5
-2.4
-0.0
stress
Def methylglyoxal 0.01 vol%
+0.3
N.D.
-0.0
-2.4
+0.1
stress
Def Polymyxin B sulfate 0.00008 mg/ml
+0.2
N.D.
-0.2
-2.0
+0.2
RCH2 grown on a colony of ecoli
-0.1
N.D.
+0.6
-2.0
+0.3
stress
Def Carbenicillin 0.008 mg/ml
+0.8
N.D.
+0.8
-1.6
+0.6
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