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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0461 and Psest_0462 are separated by 44 nucleotides
Psest_0462 and Psest_0463 overlap by 4 nucleotides
Psest_0463 and Psest_0464 are separated by 325 nucleotides
Psest_0464 and Psest_0465 are separated by 380 nucleotides
Psest_0461: Psest_0461 - Glycosyltransferase involved in LPS biosynthesis, at 507,963 to 509,984
_0461
Psest_0462: Psest_0462 - Lipid A core - O-antigen ligase and related enzymes, at 510,029 to 511,177
_0462
Psest_0463: Psest_0463 - hypothetical protein, at 511,174 to 511,458
_0463
Psest_0464: Psest_0464 - Mannosyltransferase OCH1 and related enzymes, at 511,784 to 512,512
_0464
Psest_0465: Psest_0465 - Acetyltransferase (isoleucine patch superfamily), at 512,893 to 513,597
_0465
Group
Condition
Psest
_0461
Psest
_0462
Psest
_0463
Psest
_0464
Psest
_0465
stress
Def Benzethonium chloride 0.008 mM
-4.8
-1.6
-0.6
-1.4
-1.5
carbon source
butyrate (C)
-3.2
-2.2
-0.5
-1.4
-1.8
stress
Polymyxin B sulfate 0.0001 mg/ml
-2.0
-0.9
-0.3
-2.1
-0.5
stress
Def Polymyxin B sulfate 0.0001 mg/ml
-1.9
-1.6
-0.5
-0.9
-0.5
stress
Choline chloride 90 mM
-2.4
-1.7
-0.0
-1.0
-0.1
stress
Def Polymyxin B sulfate 0.00008 mg/ml
-1.9
-1.6
-0.3
-0.6
-0.6
stress
Choline chloride 90 mM
-1.7
-1.2
-0.1
-1.0
-0.3
anaerobic
nitrate reduction - anaerobic
-1.1
-1.0
-0.2
-0.2
-0.7
stress
Lactate-nitrate; anaerobic; nickel stress sample3
-1.1
-1.2
-0.3
-0.1
-0.2
carbon source
L-Lactate (C)
-0.9
-0.6
-0.5
-0.4
-0.7
stress
Lactate-nitrate; anaerobic; nickel stress sample2
-1.2
-1.3
-0.1
+0.0
-0.2
stress
Lactate-nitrate; anaerobic; nickel stress sample1
-1.1
-1.2
-0.2
+0.0
-0.3
stress
Cephalothin 0.04 mg/ml
-0.5
-1.1
-0.5
+0.4
-0.7
stress
nitrate 250 mM
+0.8
+1.2
-0.9
-1.5
-1.3
stress
Fusidic 0.016 mg/ml
+0.6
+0.5
-0.6
-0.4
-0.7
stress
Gentamicin 0.0016 mg/ml
+1.5
+1.7
-0.1
-0.1
-0.4
stress
Def Chlorate 20 mM
+1.6
+1.3
-0.1
+0.3
-0.0
stress
Def Chlorate 40 mM
+1.4
+1.4
-0.0
+0.3
+0.3
stress
Def Cephalothin 0.04 mg/ml
+1.2
+1.1
+0.2
+0.5
+0.6
stress
Furfuryl Alcohol 0.05 vol%
+1.5
+0.5
+0.3
+0.5
+0.6
stress
Bacitracin 0.25 mg/ml
+1.0
+0.4
+0.4
+1.3
+0.6
stress
Bacitracin 0.25 mg/ml
+1.3
+0.5
+0.5
+1.2
+0.5
stress
Def Doxycycline hyclate 0.0002 mg/ml
+1.0
+0.7
+0.4
+1.1
+0.8
stress
L-Lysine 200 mM
+1.7
+1.7
-0.0
+0.1
+0.6
stress
L-Lysine 200 mM
+1.7
+1.8
-0.1
+0.4
+0.5
carbon source
L-tyrosine (C)
+1.9
+1.5
-0.0
+0.7
+0.3
stress
Def Doxycycline hyclate 0.0006 mg/ml
+1.9
+1.3
-0.0
+0.8
+0.6
stress
Def Vancomycin 0.008 mg/ml
+1.7
+1.1
+0.6
+0.9
+0.7
carbon source
L-tyrosine (C)
+2.3
+1.4
+0.3
+0.8
+0.5
stress
Def Vancomycin 0.016 mg/ml
+3.3
+1.6
+0.9
+1.7
+1.0
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