Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0444 and Psest_0445 are separated by 111 nucleotidesPsest_0445 and Psest_0446 are separated by 110 nucleotidesPsest_0446 and Psest_0447 are separated by 108 nucleotidesPsest_0447 and Psest_0448 are separated by 24 nucleotides Psest_0444: Psest_0444 - methionine-S-sulfoxide reductase, at 484,284 to 484,706 _0444 Psest_0445: Psest_0445 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 484,818 to 487,490 _0445 Psest_0446: Psest_0446 - hypothetical protein, at 487,601 to 488,128 _0446 Psest_0447: Psest_0447 - pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form, at 488,237 to 490,240 _0447 Psest_0448: Psest_0448 - pyruvate dehydrogenase E1 component, homodimeric type, at 490,265 to 492,910 _0448
Group Condition Psest_0444 Psest_0445 Psest_0446 Psest_0447 Psest_0448
carbon source L-Glutamic (C) -0.3 -2.9 +0.6 N.D. N.D.
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.0 -3.7 +1.2 N.D. N.D.
carbon source L-Lactate (C) +0.1 -3.0 +0.5 N.D. N.D.
carbon source L-Glutamic (C) +0.1 -3.0 +0.6 N.D. N.D.
nitrogen source Cytosine (N) +0.1 -2.2 +0.1 N.D. N.D.
carbon source L-Glutamine (C) -0.1 -2.9 +1.0 N.D. N.D.
carbon source L-Glutamine (C) +0.1 -3.0 +1.0 N.D. N.D.
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.1 -3.4 +1.4 N.D. N.D.
stress sodium fluoride 6.25 mM -0.1 -2.1 +0.4 N.D. N.D.
carbon source RCH2 defined media +0.3 -3.1 +1.0 N.D. N.D.
stress Def Benzethonium chloride 0.008 mM +0.7 -3.3 +1.1 N.D. N.D.
stress Def Carbenicillin 0.008 mg/ml +0.4 -2.9 +1.0 N.D. N.D.
stress Gentamicin 0.0016 mg/ml +0.1 -2.4 +0.8 N.D. N.D.
carbon source L-Glutamine (C) +0.3 -2.5 +0.8 N.D. N.D.
nitrogen source L-Glutamine (N) +0.1 -2.0 +0.6 N.D. N.D.
stress nitrate 250 mM +0.3 -2.6 +1.3 N.D. N.D.
stress Fusidic 0.016 mg/ml +0.1 -2.4 +1.3 N.D. N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml +1.0 -3.2 +1.4 N.D. N.D.
carbon source butyrate (C) +0.3 -2.4 +1.3 N.D. N.D.
carbon source butyrate (C) +0.2 -1.6 +0.7 N.D. N.D.
carbon source butyrate (C) +0.2 -1.7 +0.9 N.D. N.D.
stress Cephalothin 0.04 mg/ml +0.6 -2.4 +1.2 N.D. N.D.
nitrogen source L-Glutamic (N) +0.2 -1.5 +0.8 N.D. N.D.
anaerobic nitrate reduction - anaerobic +0.2 -1.5 +1.0 N.D. N.D.
nitrogen source L-Glutamic (N) +0.2 -1.2 +1.0 N.D. N.D.
stress Def 2-Furfuraldehyde 0.032 vol% +0.3 -1.5 +1.4 N.D. N.D.
nitrogen source L-Isoleucine (N) +0.2 -1.1 +1.4 N.D. N.D.
nitrogen source nitrite (N) +0.6 -0.8 +2.1 N.D. N.D.
nutrient L-tyrosine +1.1 +2.6 -0.2 N.D. N.D.
nutrient L-tyrosine +0.5 +2.8 +0.2 N.D. N.D.
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