Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0442 and Psest_0443 are separated by 432 nucleotidesPsest_0443 and Psest_0444 are separated by 127 nucleotidesPsest_0444 and Psest_0445 are separated by 111 nucleotidesPsest_0445 and Psest_0446 are separated by 110 nucleotides Psest_0442: Psest_0442 - ATPases of the AAA+ class, at 482,192 to 483,178 _0442 Psest_0443: Psest_0443 - methionine-S-sulfoxide reductase, at 483,611 to 484,156 _0443 Psest_0444: Psest_0444 - methionine-S-sulfoxide reductase, at 484,284 to 484,706 _0444 Psest_0445: Psest_0445 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 484,818 to 487,490 _0445 Psest_0446: Psest_0446 - hypothetical protein, at 487,601 to 488,128 _0446
Group Condition Psest_0442 Psest_0443 Psest_0444 Psest_0445 Psest_0446
temperature Glucose defined 30C timecourse1 timepoint 3 -6.6 -0.1 -0.4 -1.3 +0.1
temperature LB 30C timecourse1 timepoint 3 -6.3 -0.4 +0.2 -0.8 -0.1
stress nitrate 250 mM -3.6 -1.3 +0.3 -2.6 +1.3
temperature LB 30C timecourse2 timepoint 2 -4.8 -0.3 -0.2 -0.1 +0.1
carbon source L-Lactate (C) -2.5 -0.4 +0.1 -3.0 +0.5
temperature LB 30C timecourse1 timepoint 2 -4.4 -0.2 -0.2 -0.2 -0.1
temperature Glucose defined 30C timecourse1 timepoint 2 -4.1 -0.1 +0.1 -0.7 +0.1
stress Def Benzethonium chloride 0.008 mM -2.8 -0.2 +0.7 -3.3 +1.1
stress Def Polymyxin B sulfate 0.00008 mg/ml -1.4 -0.4 +0.0 -3.7 +1.2
stress Gentamicin 0.0016 mg/ml -2.1 -0.8 +0.1 -2.4 +0.8
nitrogen source Cytosine (N) -2.3 -0.1 +0.1 -2.2 +0.1
carbon source L-Glutamic (C) -1.7 -0.1 -0.3 -2.9 +0.6
carbon source butyrate (C) -3.4 -0.1 +0.3 -2.4 +1.3
stress Def Benzalkonium Chloride 0.002 mg/ml -3.0 -0.3 +1.0 -3.2 +1.4
nitrogen source Cytosine (N) -2.2 +0.0 +0.2 -1.9 -0.1
carbon source L-Glutamic (C) -1.6 -0.1 +0.1 -3.0 +0.6
stress Def Chloride 400 mM -3.1 -0.1 -0.3 -0.8 +0.7
carbon source L-Glutamine (C) -1.3 -0.2 -0.1 -2.9 +1.0
nitrogen source L-Glutamine (N) -1.9 -0.1 +0.1 -2.0 +0.6
stress Fusidic 0.016 mg/ml -1.7 -0.6 +0.1 -2.4 +1.3
stress Def Polymyxin B sulfate 0.0001 mg/ml -1.2 -0.2 +0.1 -3.4 +1.4
carbon source L-Glutamine (C) -1.3 -0.1 +0.1 -3.0 +1.0
carbon source RCH2 defined media -1.1 -0.4 +0.3 -3.1 +1.0
stress Cephalothin 0.04 mg/ml -1.6 -1.1 +0.6 -2.4 +1.2
carbon source L-Glutamine (C) -1.6 -0.2 +0.3 -2.5 +0.8
stress Def Carbenicillin 0.008 mg/ml -0.8 -0.6 +0.4 -2.9 +1.0
carbon source butyrate (C) -1.5 -0.3 +0.2 -1.7 +0.9
anaerobic nitrate reduction - anaerobic -1.7 -0.3 +0.2 -1.5 +1.0
stress Def 2-Furfuraldehyde 0.032 vol% -2.0 +0.1 +0.3 -1.5 +1.4
nitrogen source nitrite (N) -1.8 -0.3 +0.6 -0.8 +2.1
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