Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 424 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Psest_4326 and Psest_4327 are separated by 12 nucleotides
Psest_4327 and Psest_4328 are separated by 88 nucleotides
Psest_4328 and Psest_4329 overlap by 4 nucleotides
Psest_4329 and Psest_4330 are separated by 4 nucleotides
Psest_4326: Psest_4326 - cytochrome c oxidase, subunit II, at 4,526,063 to 4,527,196
_4326
Psest_4327: Psest_4327 - cytochrome c oxidase, subunit I, at 4,527,209 to 4,528,846
_4327
Psest_4328: Psest_4328 - Cytochrome oxidase assembly factor, at 4,528,935 to 4,529,510
_4328
Psest_4329: Psest_4329 - Heme/copper-type cytochrome/quinol oxidase, subunit 3, at 4,529,507 to 4,530,403
_4329
Psest_4330: Psest_4330 - Protein of unknown function (DUF2909)., at 4,530,408 to 4,530,611
_4330
Group
Condition
Psest
_4326
Psest
_4327
Psest
_4328
Psest
_4329
Psest
_4330
carbon source
D-Fructose (C)
-0.7
-0.6
-0.4
-0.4
-0.3
carbon source
RCH2 defined media
-0.7
-0.4
-0.6
-0.5
-0.1
stress
Def Polymyxin B sulfate 0.00008 mg/ml
-0.7
-0.4
-0.5
-0.3
-0.1
carbon source
L-Proline (C)
-0.5
-0.4
-0.3
-0.4
-0.4
stress
Def Carbenicillin 0.008 mg/ml
-0.9
-0.3
-0.4
-0.2
-0.2
stress
nitrite 2.5 mM
+0.1
-0.0
-0.9
-0.1
-1.0
stress
2-Furfuraldehyde 0.05 vol%
+0.0
+0.2
-0.3
-0.1
-1.6
stress
Gentamicin 0.0016 mg/ml
-0.5
-0.2
-0.9
-0.4
+0.2
stress
Def Polymyxin B sulfate 0.0001 mg/ml
-0.5
-0.3
-0.5
-0.4
-0.1
carbon source
D-Fructose (C)
-0.4
-0.5
-0.5
-0.3
-0.1
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.8
-0.2
-0.3
-0.4
+0.1
stress
A22 0.005 mg/ml
-0.4
-0.2
-0.4
-0.0
-0.7
carbon source
propionate (C)
-0.1
-0.1
-0.3
+0.3
-1.4
carbon source
L-Lactate (C)
-0.6
-0.3
-0.3
-0.4
+0.1
stress
Def methylglyoxal 0.01 vol%
-0.4
-0.3
-0.1
-0.4
-0.3
stress
Def Carbenicillin 0.02 mg/ml
-0.3
-0.2
-0.8
-0.1
+0.1
stress
nitrate 250 mM
-0.2
-0.3
-0.3
-0.8
+0.3
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.6
-0.2
-0.3
-0.3
+0.2
stress
Cephalothin 0.04 mg/ml
-0.7
-0.1
-0.2
-0.3
+0.2
nutrient
L-Histidine
+0.2
-0.1
-0.1
-0.2
-1.0
stress
nitrate 200 mM
-0.1
-0.2
-0.3
+0.3
-0.7
RCH2 grown on a colony of ecoli
+0.2
+0.3
-0.3
-0.1
-1.0
stress
1-ethyl-3-methylimidazolium acetate 20 mM
-0.5
-0.1
-0.6
+0.4
+0.4
stress
Lactate-nitrate; anaerobic; copper stress sample3
-0.4
-0.2
-0.3
-0.1
+0.6
metal limitation
Lactate-nitrite with YE; anaerobic; with copper; sample3
-0.4
+0.1
-0.3
+0.1
+0.7
RCH2 grown on a colony of Serratia
+0.3
-0.2
+0.5
+0.4
-0.2
stress
Cobalt chloride 0.07 mM
-0.4
+0.1
-0.3
+0.2
+1.2
stress
Furfuryl Alcohol 0.3 vol%
-0.2
+0.1
+0.1
+0.1
+1.2
RCH2 grown on a colony of ecoli
+0.2
+0.3
+0.9
+0.2
-0.3
stress
Doxycycline hyclate 0.0002 mg/ml
+0.3
-0.2
+0.3
+0.1
+1.1
remove
Psest_4326
plot
remove
Psest_4327
plot
remove
Psest_4328
remove
Psest_4329
plot
remove
Psest_4330
plot