Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_4306 and Psest_4307 are separated by 53 nucleotidesPsest_4307 and Psest_4308 are separated by 58 nucleotidesPsest_4308 and Psest_4309 overlap by 4 nucleotidesPsest_4309 and Psest_4310 are separated by 12 nucleotides Psest_4306: Psest_4306 - Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, at 4,505,121 to 4,506,446 _4306 Psest_4307: Psest_4307 - ABC-type Zn2+ transport system, periplasmic component/surface adhesin, at 4,506,500 to 4,507,531 _4307 Psest_4308: Psest_4308 - Fe2+/Zn2+ uptake regulation proteins, at 4,507,590 to 4,508,075 _4308 Psest_4309: Psest_4309 - ABC-type Mn/Zn transport systems, ATPase component, at 4,508,072 to 4,508,842 _4309 Psest_4310: Psest_4310 - ABC-type Mn2+/Zn2+ transport systems, permease components, at 4,508,855 to 4,509,640 _4310
Group Condition Psest_4306 Psest_4307 Psest_4308 Psest_4309 Psest_4310
radiation Ionizing radiation, 319.06 Gy, -0.0 -1.1 N.D. -1.1 -1.4
stress Def 5-Hydroxymethylfurfural 5 mM +0.1 -1.8 N.D. +0.2 -2.2
stress Cobalt chloride 0.07 mM -0.2 -0.1 N.D. -1.2 -2.1
carbon source RCH2 defined media -0.4 -1.2 N.D. +0.3 -2.2
stress Benzethonium chloride 0.01 mM +0.0 -1.0 N.D. -0.5 -2.0
stress Lactate-nitrate; anaerobic; dichromate stress sample2 +0.0 -1.5 N.D. -0.1 -1.7
stress Neomycin 0.004 mg/ml +0.0 -1.3 N.D. -0.2 -1.9
RCH2 grown on a colony of N2A2 -0.4 -0.1 N.D. -0.4 -2.4
RCH2 grown on a colony of Serratia +0.5 -1.0 N.D. +0.4 -3.2
nitrogen source L-Glutamic (N) -0.3 -2.3 N.D. +0.1 -0.7
nitrogen source L-Glutamic (N) -0.1 -0.2 N.D. -0.8 -2.2
stress A22 0.002 mg/ml +0.4 -1.0 N.D. -0.1 -2.6
stress Nalidixic 0.00390625 mg/ml +0.0 +0.4 N.D. -0.5 -3.1
nitrogen source L-Glutamine (N) +0.1 -1.7 N.D. +0.1 -1.6
carbon source L-tyrosine (C) -0.3 +0.3 N.D. -1.3 -1.5
stress D-Cycloserine 0.032 mg/ml +0.4 -3.0 N.D. -0.3 +0.1
stress Neomycin 0.004 mg/ml +0.2 -1.4 N.D. -0.4 -1.1
stress Cholin acetate 40 mM +0.3 -0.9 N.D. -1.1 -0.9
RCH2 grown on a colony of ecoli +0.5 -1.3 N.D. +0.1 -1.9
stress Furfuryl Alcohol 0.05 vol% -0.2 -0.5 N.D. +0.7 -2.2
anaerobic Nitrate/ lactate media with Nitrate 250mM +0.1 +0.1 N.D. +0.4 -2.7
stress Lactate-nitrate; anaerobic; nickel stress sample1 +0.1 +0.5 N.D. -0.4 -2.3
stress Def Nalidixic 0.001 mg/ml +0.2 -1.4 N.D. +0.4 -1.2
stress Benzethonium chloride 0.01 mM +0.1 +0.6 N.D. -0.8 -1.7
anaerobic nitrate reduction - anaerobic +0.2 -0.8 N.D. +0.5 -1.7
RCH2 grown on a colony of 8R2A +0.2 +0.9 N.D. -0.1 -2.4
RCH2 grown on a colony of N2C3 +0.8 -1.4 N.D. +0.1 -0.9
RCH2 grown on a colony of N2F3 +0.1 +0.8 N.D. +0.6 -2.4
stress Lactate-nitrate; anaerobic; copper stress sample3 +0.3 +1.3 N.D. -0.5 -1.6
stress Cobalt chloride 0.08 mM +0.2 +0.6 N.D. -1.1 +1.4
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