Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0424 and Psest_0426 are separated by 1418 nucleotidesPsest_0426 and Psest_0427 are separated by 26 nucleotidesPsest_0427 and Psest_0428 are separated by 753 nucleotidesPsest_0428 and Psest_0429 overlap by 4 nucleotides Psest_0424: Psest_0424 - Phage integrase family., at 461,104 to 462,975 _0424 Psest_0426: Psest_0426 - Transposase and inactivated derivatives, at 464,394 to 465,239 _0426 Psest_0427: Psest_0427 - Transposase and inactivated derivatives, at 465,266 to 465,544 _0427 Psest_0428: Psest_0428 - phosphonate ABC transporter, ATP-binding protein, at 466,298 to 467,125 _0428 Psest_0429: Psest_0429 - phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein, at 467,122 to 467,985 _0429
Group Condition Psest_0424 Psest_0426 Psest_0427 Psest_0428 Psest_0429
metal limitation Lactate-nitrite; anaerobic; sample3 -0.4 -1.3 N.D. -0.4 -0.3
temperature LB 30C timecourse1 timepoint 3 -0.8 -0.5 N.D. -0.6 -0.5
stress Cephalothin 0.04 mg/ml -0.7 -0.7 N.D. -0.3 -0.6
stress Lactate-nitrate; anaerobic; nickel stress sample1 -0.5 -1.0 N.D. -0.5 -0.2
stress Def Carbenicillin 0.008 mg/ml -0.3 -0.7 N.D. -0.6 -0.5
stress nitrate 250 mM -0.4 -0.8 N.D. -0.2 -0.7
stress Lactate-nitrate; anaerobic sample3 -0.5 -0.8 N.D. -0.3 -0.4
stress Doxycycline hyclate 0.0002 mg/ml -0.7 -1.3 N.D. +0.1 -0.1
stress Gentamicin 0.0016 mg/ml -0.1 -1.0 N.D. -0.6 -0.4
stress Lactate-nitrate; anaerobic; dichromate stress sample1 -0.5 -0.4 N.D. -0.6 -0.4
stress Lactate-nitrate; anaerobic; nickel stress sample2 -0.4 -0.9 N.D. -0.1 -0.4
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample3 -0.6 -0.4 N.D. -0.5 -0.3
metal limitation Lactate; aerobic; with copper, sample3 -0.5 -0.6 N.D. -0.2 -0.4
stress Lactate-nitrate; anaerobic sample2 -0.4 -0.8 N.D. -0.3 -0.2
stress Lactate-nitrate; anaerobic; cadmium stress sample1 -0.4 -0.8 N.D. -0.3 -0.2
temperature LB 30C timecourse1 timepoint 2 -0.5 -0.5 N.D. -0.2 -0.5
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample1 -0.3 -0.5 N.D. -0.6 -0.3
metal limitation Lactate-nitrite; anaerobic; sample1 -0.2 -0.8 N.D. -0.5 -0.2
temperature LB 30C timecourse2 timepoint 1 -0.6 -0.5 N.D. -0.2 -0.3
RCH2 grown on a colony of N2A2 -0.3 -0.7 N.D. -0.3 -0.2
stress Fusidic 0.016 mg/ml -0.3 -0.9 N.D. -0.1 -0.3
carbon source butyrate (C) -0.3 -0.4 N.D. -0.6 -0.3
stress Lactate-nitrate; anaerobic; dichromate stress sample2 -0.8 -0.5 N.D. -0.1 -0.1
metal limitation Lactate; aerobic; with copper, sample2 -0.1 -0.5 N.D. -0.6 -0.4
RCH2 grown on a colony of Serratia -0.3 -1.1 N.D. +0.1 +0.2
stress Bacitracin 0.25 mg/ml -0.5 -1.0 N.D. +0.4 +0.1
stress syringaldehyde 4 mM +0.3 -0.9 N.D. +0.1 +0.3
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.4 +0.4 N.D. +0.6 -0.1
carbon source propionate (C) +0.7 +0.5 N.D. -0.3 -0.0
RCH2 grown on a colony of ecoli +0.5 +1.5 N.D. +0.1 +0.2
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