Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_4297 and Psest_4298 are separated by 0 nucleotidesPsest_4298 and Psest_4299 overlap by 8 nucleotidesPsest_4299 and Psest_4300 are separated by 128 nucleotidesPsest_4300 and Psest_4301 overlap by 4 nucleotides Psest_4297: Psest_4297 - PAS domain S-box, at 4,491,792 to 4,494,203 _4297 Psest_4298: Psest_4298 - Response regulator containing a CheY-like receiver domain and a GGDEF domain, at 4,494,204 to 4,494,590 _4298 Psest_4299: Psest_4299 - diguanylate cyclase (GGDEF) domain, at 4,494,583 to 4,496,220 _4299 Psest_4300: Psest_4300 - PAS domain S-box, at 4,496,349 to 4,499,219 _4300 Psest_4301: Psest_4301 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 4,499,216 to 4,499,605 _4301
Group Condition Psest_4297 Psest_4298 Psest_4299 Psest_4300 Psest_4301
nitrogen source L-Isoleucine (N) -1.7 -2.8 -0.6 -0.2 -1.7
carbon source L-tyrosine (C) -0.5 -4.8 -0.5 +0.0 -0.7
nitrogen source L-Glutamic (N) -1.1 -2.8 -0.1 -0.9 -0.5
stress Def Benzethonium chloride 0.008 mM -1.5 -3.3 -0.3 +0.1 -0.1
stress Def Polymyxin B sulfate 0.0001 mg/ml -1.3 -3.1 -0.4 -0.0 +0.2
stress Def Polymyxin B sulfate 0.00008 mg/ml -1.6 -3.4 -0.1 +0.2 +0.3
carbon source butyrate (C) -1.1 -3.3 -0.1 -0.0 +0.0
carbon source butyrate (C) -1.0 -3.4 +0.2 -0.2 +0.0
carbon source butyrate (C) -1.8 -2.8 +0.2 +0.1 +0.1
carbon source RCH2 defined media -0.5 -3.7 -0.1 -0.1 +0.2
nitrogen source L-Glutamic (N) -1.0 -2.9 +0.1 -0.1 -0.1
nitrogen source Ammonium chloride (N) -0.3 -2.9 -0.1 -0.4 -0.1
carbon source L-Glutamic (C) -1.3 -2.0 +0.0 -0.0 -0.5
stress Def Carbenicillin 0.02 mg/ml -0.9 -2.6 +0.3 -0.2 -0.1
carbon source L-Glutamine (C) -0.5 -3.1 +0.1 +0.1 +0.0
carbon source succinate (C) -0.3 -2.9 -0.0 -0.1 +0.1
carbon source L-Glutamic (C) -1.0 -2.4 +0.1 +0.0 +0.1
carbon source Trisodium citrate (C) -0.3 -2.5 -0.1 +0.3 -0.2
carbon source RCH2 defined media -1.4 -1.7 -0.2 +0.3 +0.3
stress Carbenicillin 0.008 mg/ml +0.5 -2.8 +0.1 +0.1 -0.6
radiation Ionizing radiation, 319.06 Gy, -0.4 -2.4 -0.2 +0.2 +0.2
stress Nalidixic 0.00390625 mg/ml +0.2 -2.8 -0.2 -0.0 +0.4
stress Def Benzalkonium Chloride 0.002 mg/ml -0.9 -1.9 +0.0 -0.2 +0.6
nitrogen source Urea (N) -0.3 -2.2 -0.2 -0.2 +0.5
RCH2 grown on a colony of N2F3 -0.3 -2.7 -0.0 +0.5 +0.2
stress Chlorate 75 mM -0.4 -2.6 +0.5 +0.0 +0.3
carbon source propionate (C) +0.5 -2.6 +0.1 +0.6 +0.2
RCH2 grown on a colony of N2A2 +0.4 +2.0 +0.4 -0.3 -1.2
carbon source Glucose defined media -0.2 +2.3 +0.2 -0.3 -0.3
RCH2 grown on a colony of Serratia -0.1 +3.3 +0.2 -0.5 +0.2
remove
Psest_4297
plot
remove
Psest_4298
plot
remove
Psest_4299
remove
Psest_4300
plot
remove
Psest_4301
plot