Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_4287 and Psest_4288 are separated by 240 nucleotidesPsest_4288 and Psest_4289 are separated by 58 nucleotidesPsest_4289 and Psest_4290 are separated by 132 nucleotidesPsest_4290 and Psest_4291 are separated by 62 nucleotides Psest_4287: Psest_4287 - Predicted glutamine amidotransferases, at 4,479,929 to 4,480,675 _4287 Psest_4288: Psest_4288 - Glutamate--putrescine ligase (EC 6.3.1.11) (from data), at 4,480,916 to 4,482,289 _4288 Psest_4289: Psest_4289 - Transcriptional regulator, at 4,482,348 to 4,482,998 _4289 Psest_4290: Psest_4290 - N-carbamoylputrescine amidase, at 4,483,131 to 4,484,012 _4290 Psest_4291: Psest_4291 - agmatine deiminase, at 4,484,075 to 4,485,181 _4291
Group Condition Psest_4287 Psest_4288 Psest_4289 Psest_4290 Psest_4291
nitrogen source Putrescine (N) -5.1 -3.2 -0.3 -0.3 +0.2
nitrogen source L-Citrulline (N) -3.1 -2.7 -0.2 -1.0 -0.9
nitrogen source L-Arginine (N) -3.1 -2.6 +0.0 -1.2 -0.8
nitrogen source L-Citrulline (N) -3.1 -2.7 -0.2 -1.0 -0.2
nitrogen source Putrescine (N) -3.7 -2.4 -0.1 -0.1 -0.6
nitrogen source Putrescine (N) -3.6 -2.2 -0.7 -0.0 +0.1
stress Def Chloride 400 mM -0.1 -1.3 -0.5 -0.6 -0.1
carbon source Glycolic Acid (C) -1.5 -0.4 -0.1 -0.3 -0.4
stress Chlorate 75 mM -1.7 -0.6 -0.3 -0.0 +0.1
RCH2 grown on a colony of N2F3 -2.6 +0.2 -0.4 -0.1 +0.4
nitrogen source L-Valine (N) -3.2 +0.4 -0.0 +0.1 +0.3
nitrogen source nitrite (N) -1.8 +0.0 -0.3 -0.4 -0.0
stress Choline Lysine 20 mM -0.5 +0.4 +0.2 -1.2 -1.1
stress Furfuryl Alcohol 0.05 vol% -0.5 +0.2 -1.5 +0.5 -0.8
nitrogen source L-Valine (N) -2.5 +0.6 +0.0 +0.1 -0.1
stress Def 2-Furfuraldehyde 0.032 vol% -0.5 +0.4 +0.5 -1.6 -0.8
nitrogen source L-Isoleucine (N) -1.9 +0.4 +0.0 -0.2 -0.2
stress Fusidic 0.016 mg/ml +0.4 -0.3 +0.0 -1.3 -0.4
nitrogen source L-Isoleucine (N) -1.9 +0.4 -0.1 +0.2 -0.2
stress Gentamicin 0.0016 mg/ml +0.7 -0.2 +0.1 -1.0 -0.7
nitrogen source L-Isoleucine (N) -1.1 +0.3 +0.3 -0.6 +0.2
RCH2 grown on a colony of ecoli -1.2 -0.0 +0.1 +0.7 +0.5
stress Def Carbenicillin 0.008 mg/ml +0.3 -0.6 +0.3 -0.4 +0.9
stress Cephalothin 0.04 mg/ml +0.8 -0.5 +0.5 -0.8 +0.4
stress Def Benzalkonium Chloride 0.002 mg/ml +0.9 -0.6 +0.4 -0.6 +0.7
carbon source propionate (C) -0.4 +1.9 +0.2 -0.5 +0.4
nitrogen source nitrite (N) +0.8 +0.1 +0.8 -0.3 +0.4
stress nitrate 250 mM +1.0 -0.5 +0.7 +0.1 +0.6
stress Def Benzethonium chloride 0.008 mM +1.2 -0.4 +0.4 +0.3 +0.8
stress A22 0.005 mg/ml +0.9 +0.3 +0.2 +0.6 +0.6
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