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Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_4287 and Psest_4288 are separated by 240 nucleotides
Psest_4288 and Psest_4289 are separated by 58 nucleotides
Psest_4289 and Psest_4290 are separated by 132 nucleotides
Psest_4290 and Psest_4291 are separated by 62 nucleotides
Psest_4287: Psest_4287 - Predicted glutamine amidotransferases, at 4,479,929 to 4,480,675
_4287
Psest_4288: Psest_4288 - Glutamate--putrescine ligase (EC 6.3.1.11)
(from data)
, at 4,480,916 to 4,482,289
_4288
Psest_4289: Psest_4289 - Transcriptional regulator, at 4,482,348 to 4,482,998
_4289
Psest_4290: Psest_4290 - N-carbamoylputrescine amidase, at 4,483,131 to 4,484,012
_4290
Psest_4291: Psest_4291 - agmatine deiminase, at 4,484,075 to 4,485,181
_4291
Group
Condition
Psest
_4287
Psest
_4288
Psest
_4289
Psest
_4290
Psest
_4291
nitrogen source
Putrescine (N)
-5.1
-3.2
-0.3
-0.3
+0.2
nitrogen source
L-Citrulline (N)
-3.1
-2.7
-0.2
-1.0
-0.9
nitrogen source
L-Arginine (N)
-3.1
-2.6
+0.0
-1.2
-0.8
nitrogen source
L-Citrulline (N)
-3.1
-2.7
-0.2
-1.0
-0.2
nitrogen source
Putrescine (N)
-3.7
-2.4
-0.1
-0.1
-0.6
nitrogen source
Putrescine (N)
-3.6
-2.2
-0.7
-0.0
+0.1
stress
Def Chloride 400 mM
-0.1
-1.3
-0.5
-0.6
-0.1
carbon source
Glycolic Acid (C)
-1.5
-0.4
-0.1
-0.3
-0.4
stress
Chlorate 75 mM
-1.7
-0.6
-0.3
-0.0
+0.1
RCH2 grown on a colony of N2F3
-2.6
+0.2
-0.4
-0.1
+0.4
nitrogen source
L-Valine (N)
-3.2
+0.4
-0.0
+0.1
+0.3
nitrogen source
nitrite (N)
-1.8
+0.0
-0.3
-0.4
-0.0
stress
Choline Lysine 20 mM
-0.5
+0.4
+0.2
-1.2
-1.1
stress
Furfuryl Alcohol 0.05 vol%
-0.5
+0.2
-1.5
+0.5
-0.8
nitrogen source
L-Valine (N)
-2.5
+0.6
+0.0
+0.1
-0.1
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.5
+0.4
+0.5
-1.6
-0.8
nitrogen source
L-Isoleucine (N)
-1.9
+0.4
+0.0
-0.2
-0.2
stress
Fusidic 0.016 mg/ml
+0.4
-0.3
+0.0
-1.3
-0.4
nitrogen source
L-Isoleucine (N)
-1.9
+0.4
-0.1
+0.2
-0.2
stress
Gentamicin 0.0016 mg/ml
+0.7
-0.2
+0.1
-1.0
-0.7
nitrogen source
L-Isoleucine (N)
-1.1
+0.3
+0.3
-0.6
+0.2
RCH2 grown on a colony of ecoli
-1.2
-0.0
+0.1
+0.7
+0.5
stress
Def Carbenicillin 0.008 mg/ml
+0.3
-0.6
+0.3
-0.4
+0.9
stress
Cephalothin 0.04 mg/ml
+0.8
-0.5
+0.5
-0.8
+0.4
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.9
-0.6
+0.4
-0.6
+0.7
carbon source
propionate (C)
-0.4
+1.9
+0.2
-0.5
+0.4
nitrogen source
nitrite (N)
+0.8
+0.1
+0.8
-0.3
+0.4
stress
nitrate 250 mM
+1.0
-0.5
+0.7
+0.1
+0.6
stress
Def Benzethonium chloride 0.008 mM
+1.2
-0.4
+0.4
+0.3
+0.8
stress
A22 0.005 mg/ml
+0.9
+0.3
+0.2
+0.6
+0.6
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