Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_0422 and Psest_0423 overlap by 8 nucleotidesPsest_0423 and Psest_0424 overlap by 8 nucleotidesPsest_0424 and Psest_0426 are separated by 1418 nucleotidesPsest_0426 and Psest_0427 are separated by 26 nucleotides Psest_0422: Psest_0422 - Site-specific recombinase XerD, at 457,937 to 459,058 _0422 Psest_0423: Psest_0423 - hypothetical protein, at 459,051 to 461,111 _0423 Psest_0424: Psest_0424 - Phage integrase family., at 461,104 to 462,975 _0424 Psest_0426: Psest_0426 - Transposase and inactivated derivatives, at 464,394 to 465,239 _0426 Psest_0427: Psest_0427 - Transposase and inactivated derivatives, at 465,266 to 465,544 _0427
Group Condition Psest_0422 Psest_0423 Psest_0424 Psest_0426 Psest_0427
stress Gentamicin 0.0016 mg/ml -1.8 -0.8 -0.1 -1.0 N.D.
stress Cephalothin 0.04 mg/ml -0.8 -1.0 -0.7 -0.7 N.D.
stress Def Carbenicillin 0.008 mg/ml -1.2 -0.8 -0.3 -0.7 N.D.
stress Choline Lysine 20 mM -1.1 -0.6 -0.1 -0.8 N.D.
temperature LB 30C timecourse1 timepoint 3 -0.3 -0.7 -0.8 -0.5 N.D.
stress nitrate 250 mM -0.3 -0.7 -0.4 -0.8 N.D.
stress Fusidic 0.016 mg/ml -0.5 -0.5 -0.3 -0.9 N.D.
metal limitation Lactate-nitrite; anaerobic; sample3 -0.0 -0.4 -0.4 -1.3 N.D.
stress Choline Lysine 20 mM -0.9 -0.4 -0.5 -0.3 N.D.
temperature LB 30C timecourse2 timepoint 1 -0.6 -0.3 -0.6 -0.5 N.D.
stress Choline chloride 90 mM -1.0 -0.2 -0.3 -0.5 N.D.
stress Lactate-nitrate; anaerobic; nickel stress sample1 -0.1 -0.4 -0.5 -1.0 N.D.
stress Lactate-nitrate; anaerobic; nickel stress sample2 -0.3 -0.3 -0.4 -0.9 N.D.
RCH2 grown on a colony of Serratia -0.7 +0.1 -0.3 -1.1 N.D.
carbon source RCH2 defined media -0.4 -0.6 -0.3 -0.4 N.D.
stress Lactate-nitrate; anaerobic sample3 -0.2 -0.2 -0.5 -0.8 N.D.
stress Def Thallium(I) acetate 0.125 mg/ml -0.5 -0.3 -0.3 -0.6 N.D.
stress Nalidixic 0.001 mg/ml -0.4 -0.4 -0.4 -0.5 N.D.
stress Lactate-nitrate; anaerobic; dichromate stress sample2 +0.3 -0.5 -0.8 -0.5 N.D.
stress Doxycycline hyclate 0.0002 mg/ml +0.4 +0.1 -0.7 -1.3 N.D.
stress Bacitracin 0.25 mg/ml +0.2 +0.2 -0.5 -1.0 N.D.
stress Lactate-nitrate; anaerobic sample2 +0.4 -0.2 -0.4 -0.8 N.D.
stress Lactate-nitrate; anaerobic sample1 +0.6 -0.3 -0.2 -1.0 N.D.
stress methylglyoxal 0.0016 vol% +0.2 +0.3 +0.0 -1.3 N.D.
stress Bacitracin 0.25 mg/ml -0.1 +0.5 -0.3 +0.8 N.D.
carbon source propionate (C) -0.2 +0.9 +0.8 -0.2 N.D.
stress L-Lysine 200 mM +0.5 +0.7 +0.6 -0.4 N.D.
stress Nalidixic 0.00390625 mg/ml +0.3 +0.3 +0.1 +1.0 N.D.
stress nitrate 200 mM +0.6 +0.6 +0.6 -0.1 N.D.
RCH2 grown on a colony of ecoli -0.0 -0.2 +0.5 +1.5 N.D.
remove
Psest_0422
plot		 remove
Psest_0423
plot		 remove
Psest_0424		 remove
Psest_0426
plot		 remove
Psest_0427
plot