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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_4237 and Psest_4238 are separated by 301 nucleotides
Psest_4238 and Psest_4239 are separated by 37 nucleotides
Psest_4239 and Psest_4240 are separated by 167 nucleotides
Psest_4240 and Psest_4241 are separated by 307 nucleotides
Psest_4237: Psest_4237 - succinate-semialdehyde dehydrogenase, at 4,420,955 to 4,422,403
_4237
Psest_4238: Psest_4238 - Cytochrome c556, at 4,422,705 to 4,423,169
_4238
Psest_4239: Psest_4239 - Cytochrome b, at 4,423,207 to 4,423,902
_4239
Psest_4240: Psest_4240 - tRNA_Arg_CCG, at 4,424,070 to 4,424,146
_4240
Psest_4241: Psest_4241 - hypothetical protein, at 4,424,454 to 4,424,588
_4241
Group
Condition
Psest
_4237
Psest
_4238
Psest
_4239
Psest
_4240
Psest
_4241
stress
Def Phosphomycin 0.125 mg/ml
-0.6
N.D.
-0.9
N.D.
-0.8
stress
Bacitracin 0.25 mg/ml
-0.1
N.D.
-0.2
N.D.
-2.0
stress
Bacitracin 0.25 mg/ml
-0.1
N.D.
-0.2
N.D.
-1.6
stress
Def Cephalothin 0.08 mg/ml
-0.7
N.D.
-0.4
N.D.
-0.7
stress
Def Doxycycline hyclate 0.0006 mg/ml
-0.7
N.D.
-0.3
N.D.
-0.8
stress
Lactate-nitrate; anaerobic; copper stress sample1
+0.0
N.D.
-1.6
N.D.
+0.0
stress
Lactate-nitrate; anaerobic; copper stress sample3
+0.1
N.D.
-1.2
N.D.
-0.3
stress
5-Hydroxymethylfurfural 5 mM
-0.0
N.D.
-0.1
N.D.
-1.3
stress
Def A22 0.015 mg/ml
-0.6
N.D.
-0.4
N.D.
-0.3
stress
Def Carbenicillin 0.02 mg/ml
-0.8
N.D.
-0.3
N.D.
-0.2
stress
2-Furfuraldehyde 0.05 vol%
+0.1
N.D.
-0.1
N.D.
-1.1
stress
Lactate-nitrate; anaerobic; copper stress sample2
+0.2
N.D.
-1.3
N.D.
+0.5
stress
Furfuryl Alcohol 0.05 vol%
-0.5
N.D.
+0.3
N.D.
-0.4
stress
Def Chloride 400 mM
-0.9
N.D.
+0.6
N.D.
-0.1
stress
Cephalothin 0.04 mg/ml
+0.6
N.D.
+0.2
N.D.
-0.6
carbon source
propionate (C)
-0.2
N.D.
-0.2
N.D.
+1.0
carbon source
L-Glutamine (C)
-0.1
N.D.
-0.3
N.D.
+1.1
carbon source
butyrate (C)
+0.4
N.D.
-0.2
N.D.
+0.8
stress
Fusidic 0.016 mg/ml
+0.7
N.D.
-0.2
N.D.
+0.5
carbon source
L-Glutamine (C)
-0.0
N.D.
-0.1
N.D.
+1.2
RCH2 grown on a colony of N2A2
-0.1
N.D.
+0.2
N.D.
+1.1
stress
Benzalkonium Chloride 0.002 mg/ml
+0.5
N.D.
+0.3
N.D.
+0.4
stress
Gentamicin 0.0016 mg/ml
+0.4
N.D.
+0.3
N.D.
+0.6
stress
nitrate 250 mM
+1.4
N.D.
-0.2
N.D.
+0.4
stress
Def Polymyxin B sulfate 0.00008 mg/ml
+0.6
N.D.
+0.4
N.D.
+0.7
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.6
N.D.
+0.7
N.D.
+0.4
stress
Def Polymyxin B sulfate 0.0001 mg/ml
+0.5
N.D.
+0.3
N.D.
+0.9
stress
Chlorate 75 mM
+0.6
N.D.
+1.4
N.D.
+0.1
stress
Def Chlorate 40 mM
+0.3
N.D.
+1.7
N.D.
+0.1
stress
Def Chlorate 20 mM
+0.2
N.D.
+1.7
N.D.
+0.9
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