Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0414 and Psest_0415 are separated by 1 nucleotidesPsest_0415 and Psest_0416 are separated by 85 nucleotidesPsest_0416 and Psest_0417 are separated by 360 nucleotidesPsest_0417 and Psest_0418 are separated by 149 nucleotides Psest_0414: Psest_0414 - biotin biosynthesis protein BioC, at 449,651 to 450,445 _0414 Psest_0415: Psest_0415 - dethiobiotin synthase, at 450,447 to 451,133 _0415 Psest_0416: Psest_0416 - hypothetical protein, at 451,219 to 451,467 _0416 Psest_0417: Psest_0417 - Acyl-CoA dehydrogenases, at 451,828 to 453,633 _0417 Psest_0418: Psest_0418 - diguanylate cyclase (GGDEF) domain, at 453,783 to 455,072 _0418
Group Condition Psest_0414 Psest_0415 Psest_0416 Psest_0417 Psest_0418
carbon source L-Proline (C) -3.4 -2.8 +0.2 -2.6 -0.3
stress Def Phosphomycin 0.125 mg/ml -3.3 -2.8 +0.5 -2.4 +0.1
stress Def 2-Furfuraldehyde 0.032 vol% -3.7 -3.1 -0.7 +0.1 -0.2
stress Paraquat dichloride 0.015 mg/ml -3.9 -4.1 +0.5 -0.1 +0.0
temperature Glucose defined 30C timecourse1 timepoint 3 -2.7 -2.3 +0.0 -1.7 -0.1
stress Def Neomycin 0.0008 mg/ml -1.6 -2.6 -0.2 -2.3 +0.1
carbon source L-tyrosine (C) +0.6 -4.4 -0.8 -1.5 +0.2
stress Def Polymyxin B sulfate 0.0001 mg/ml -3.4 -4.1 +0.2 +1.4 +0.2
RCH2 grown on a colony of 8R2A -4.2 -2.7 +0.1 +1.1 +0.0
stress Paraquat dichloride 0.015 mg/ml -3.6 -1.6 -0.2 -0.3 +0.3
stress Def Chloride 400 mM -4.3 -3.7 -0.2 +3.1 -0.1
stress Def Benzethonium chloride 0.008 mM -3.3 -2.5 +0.2 +0.7 +0.1
stress Def Chlorate 20 mM -2.3 -3.0 -0.7 +1.8 +0.2
stress Def Polymyxin B sulfate 0.00008 mg/ml -2.9 -2.8 -0.2 +1.8 +0.1
stress Def Chlorate 40 mM -3.0 -2.5 -0.1 +1.7 +0.1
nitrogen source nitrite (N) -2.2 -3.0 +0.1 +1.4 -0.1
carbon source RCH2 defined media -2.8 -1.8 -0.1 +1.2 +0.2
nitrogen source Adenine (N) -2.8 -2.7 -0.3 +2.5 +0.1
nitrogen source nitrate (N) -2.5 -2.1 -0.2 +1.8 -0.1
stress Def Dimethyl Sulfoxide 5 vol% -1.8 -2.7 +0.2 +1.3 -0.0
carbon source RCH2 defined media -2.6 -2.8 +0.2 +2.1 -0.0
stress Def methylglyoxal 0.01 vol% -2.2 -2.3 -0.1 +1.8 -0.1
nitrogen source L-Alanine (N) -2.1 -2.3 +0.1 +1.7 -0.2
nitrogen source L-Alanine (N) -1.2 -2.7 -0.1 +2.3 -0.2
nitrogen source L-Alanine (N) -3.3 -2.4 -0.0 +4.2 -0.1
stress D-Cycloserine 0.032 mg/ml -1.6 -1.6 -0.6 +2.6 -0.1
nitrogen source nitrite (N) -1.6 -2.2 +0.1 +3.1 -0.1
stress Def Benzalkonium Chloride 0.002 mg/ml -2.3 -1.4 +0.0 +3.2 +0.3
carbon source butyrate (C) -1.4 -0.5 -0.3 +2.7 +3.6
stress Furfuryl Alcohol 0.05 vol% +1.2 +1.6 +0.2 +4.0 +0.1
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