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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0412 and Psest_0413 overlap by 8 nucleotides
Psest_0413 and Psest_0414 overlap by 8 nucleotides
Psest_0414 and Psest_0415 are separated by 1 nucleotides
Psest_0415 and Psest_0416 are separated by 85 nucleotides
Psest_0412: Psest_0412 - 8-amino-7-oxononanoate synthase, at 447,762 to 448,940
_0412
Psest_0413: Psest_0413 - Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily), at 448,933 to 449,658
_0413
Psest_0414: Psest_0414 - biotin biosynthesis protein BioC, at 449,651 to 450,445
_0414
Psest_0415: Psest_0415 - dethiobiotin synthase, at 450,447 to 451,133
_0415
Psest_0416: Psest_0416 - hypothetical protein, at 451,219 to 451,467
_0416
Group
Condition
Psest
_0412
Psest
_0413
Psest
_0414
Psest
_0415
Psest
_0416
stress
Def Polymyxin B sulfate 0.0001 mg/ml
-4.0
-4.3
-3.4
-4.1
+0.2
stress
Paraquat dichloride 0.015 mg/ml
-4.1
-4.0
-3.9
-4.1
+0.5
stress
Def Chloride 400 mM
-3.8
-3.4
-4.3
-3.7
-0.2
stress
Def 2-Furfuraldehyde 0.032 vol%
-3.5
-3.1
-3.7
-3.1
-0.7
stress
Paraquat dichloride 0.015 mg/ml
-3.5
-4.4
-3.6
-1.6
-0.2
stress
Def Benzethonium chloride 0.008 mM
-3.8
-3.5
-3.3
-2.5
+0.2
stress
Def Polymyxin B sulfate 0.00008 mg/ml
-3.8
-3.1
-2.9
-2.8
-0.2
carbon source
L-Proline (C)
-3.6
-2.8
-3.4
-2.8
+0.2
RCH2 grown on a colony of 8R2A
-2.8
-2.5
-4.2
-2.7
+0.1
stress
Def Chlorate 40 mM
-2.6
-3.4
-3.0
-2.5
-0.1
nitrogen source
L-Alanine (N)
-3.0
-2.5
-3.3
-2.4
-0.0
stress
Def Chlorate 20 mM
-2.8
-2.3
-2.3
-3.0
-0.7
stress
Def Cephalothin 0.04 mg/ml
-3.1
-3.0
-1.7
-3.0
-0.0
stress
Def Cisplatin 0.0002 mg/ml
-2.8
-3.4
-2.0
-2.7
-0.0
temperature
Glucose defined 30C timecourse1 timepoint 3
-2.4
-3.0
-2.7
-2.3
+0.0
stress
Def Lomefloxacin 0.00004 mM
-2.3
-2.2
-2.8
-2.9
+0.0
nitrogen source
Adenine (N)
-2.2
-2.2
-2.8
-2.7
-0.3
carbon source
RCH2 defined media
-2.4
-2.3
-2.6
-2.8
+0.2
stress
Def Phosphomycin 0.125 mg/ml
-2.3
-1.8
-3.3
-2.8
+0.5
stress
Def Neomycin 0.0002 mg/ml
-2.4
-2.7
-2.6
-2.0
+0.2
carbon source
RCH2 defined media
-2.2
-2.3
-2.4
-2.2
-0.2
nitrogen source
nitrate (N)
-2.4
-1.9
-2.5
-2.1
-0.2
carbon source
RCH2 defined media
-2.3
-2.1
-2.8
-1.8
-0.1
nitrogen source
L-Alanine (N)
-2.7
-2.0
-2.1
-2.3
+0.1
carbon source
D,L-Lactate (C)
-2.2
-1.8
-1.6
-3.4
+0.0
stress
Def Dimethyl Sulfoxide 5 vol%
-2.1
-2.5
-1.8
-2.7
+0.2
nitrogen source
nitrite (N)
-2.0
-1.7
-2.2
-3.0
+0.1
carbon source
D-Lactate (C)
-2.2
-2.0
-2.4
-2.0
-0.1
stress
Choline Lysine 20 mM
-2.8
-2.2
-1.7
-1.8
+0.5
carbon source
L-tyrosine (C)
-1.8
-1.1
+0.6
-4.4
-0.8
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