Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_4169 and Psest_4170 are separated by 3 nucleotidesPsest_4170 and Psest_4171 are separated by 1 nucleotidesPsest_4171 and Psest_4172 overlap by 29 nucleotidesPsest_4172 and Psest_4173 are separated by 20 nucleotides Psest_4169: Psest_4169 - ATPase FliI/YscN family, at 4,347,386 to 4,348,720 _4169 Psest_4170: Psest_4170 - Flagellar biosynthesis/type III secretory pathway protein, at 4,348,724 to 4,349,422 _4170 Psest_4171: Psest_4171 - Flagellar motor switch protein, at 4,349,424 to 4,350,491 _4171 Psest_4172: Psest_4172 - flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF), at 4,350,463 to 4,352,139 _4172 Psest_4173: Psest_4173 - flagellar hook-basal body complex protein FliE, at 4,352,160 to 4,352,480 _4173
Group Condition Psest_4169 Psest_4170 Psest_4171 Psest_4172 Psest_4173
stress Polymyxin B sulfate 0.0001 mg/ml -0.5 -1.5 -0.5 -1.2 N.D.
RCH2 grown on a colony of N2C3 +0.0 -2.9 -0.4 +0.4 N.D.
stress Def Neomycin 0.0008 mg/ml +0.1 -1.9 +0.0 -0.5 N.D.
lb LB -0.1 -1.8 -0.0 -0.2 N.D.
stress Bacitracin 0.25 mg/ml -0.2 -1.1 -0.3 -0.6 N.D.
temperature LB 26C sample1 +0.2 -1.5 -0.1 -0.8 N.D.
stress Chlorate 75 mM -0.1 -1.4 -0.1 -0.5 N.D.
stress Benzethonium chloride 0.0125 mM +0.0 -1.6 -0.0 -0.2 N.D.
stress nitrite 2.5 mM -0.2 -1.3 -0.4 +0.2 N.D.
stress Cobalt chloride 0.07 mM -0.2 -1.5 -0.1 +0.2 N.D.
stress Nickel (II) chloride 0.9 mM -0.4 -1.7 +0.1 +0.6 N.D.
RCH2 grown on a colony of N2F3 -0.2 -1.7 +0.7 -0.1 N.D.
temperature LB 30C timecourse2 timepoint 2 -0.1 -1.1 -0.4 +0.3 N.D.
stress Def Vancomycin 0.016 mg/ml +0.3 -1.0 +0.1 -0.4 N.D.
stress Aluminum chloride 0.3 mM -0.2 -1.3 -0.0 +0.5 N.D.
carbon source propionate (C) +0.5 -1.7 -0.0 +0.5 N.D.
vitamin No vitamins t1 -0.0 -1.3 +0.0 +0.6 N.D.
stress D-Cycloserine 0.032 mg/ml -0.0 +1.5 -0.3 -1.1 N.D.
stress Gentamicin 0.0016 mg/ml +0.3 +0.7 -0.3 -0.5 N.D.
nitrogen source nitrite (N) +0.4 +1.1 -0.4 -0.6 N.D.
stress Def Carbenicillin 0.02 mg/ml +0.5 -1.2 +0.6 +0.9 N.D.
stress 2-Furfuraldehyde 0.05 vol% +0.1 +1.2 +0.1 -0.5 N.D.
nitrogen source nitrite (N) +0.4 +1.1 -0.0 -0.5 N.D.
RCH2 grown on a colony of 8R2A +0.2 +1.1 -0.4 +0.1 N.D.
stress Cephalothin 0.04 mg/ml +0.5 +1.5 -0.0 -0.4 N.D.
stress Thallium(I) acetate 0.1 mg/ml -0.1 +0.4 +0.4 +1.0 N.D.
nitrogen source D-Alanine (N) +0.3 +1.3 +0.1 +0.2 N.D.
nitrogen source L-Alanine (N) +0.4 +1.0 +0.3 +0.2 N.D.
stress Lactate-nitrate; anaerobic; copper stress sample1 +0.3 +1.6 -0.0 +0.0 N.D.
stress Furfuryl Alcohol 0.05 vol% -0.4 +2.2 +0.6 -0.0 N.D.
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