Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0408 and Psest_0409 are separated by 489 nucleotidesPsest_0409 and Psest_0410 are separated by 71 nucleotidesPsest_0410 and Psest_0411 are separated by 93 nucleotidesPsest_0411 and Psest_0412 are separated by 107 nucleotides Psest_0408: Psest_0408 - Protein involved in catabolism of external DNA, at 443,417 to 444,265 _0408 Psest_0409: Psest_0409 - Putative homoserine kinase type II (protein kinase fold), at 444,755 to 445,729 _0409 Psest_0410: Psest_0410 - Predicted amidophosphoribosyltransferases, at 445,801 to 446,505 _0410 Psest_0411: Psest_0411 - biotin synthetase, at 446,599 to 447,654 _0411 Psest_0412: Psest_0412 - 8-amino-7-oxononanoate synthase, at 447,762 to 448,940 _0412
Group Condition Psest_0408 Psest_0409 Psest_0410 Psest_0411 Psest_0412
stress Def Benzethonium chloride 0.008 mM +0.7 -0.4 -0.6 -5.1 -3.8
stress Paraquat dichloride 0.015 mg/ml -0.3 -0.0 -0.4 -4.2 -4.1
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.6 +0.1 -0.1 -5.6 -4.0
stress Def Chloride 400 mM -0.4 -0.4 -0.2 -4.1 -3.8
stress Paraquat dichloride 0.015 mg/ml -0.4 +0.1 -0.9 -3.2 -3.5
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.8 -0.4 -0.2 -4.4 -3.8
RCH2 grown on a colony of 8R2A +0.7 -1.1 +0.2 -4.8 -2.8
vitamin No vitamins t2 -0.4 -1.0 -0.7 -3.4 -2.2
stress Def Cisplatin 0.0002 mg/ml -0.1 -0.3 -0.4 -3.9 -2.8
nitrogen source L-Alanine (N) +0.1 +0.2 +0.1 -4.7 -3.0
vitamin No vitamins t1 -0.4 -1.1 -0.8 -2.4 -1.8
stress Def Cephalothin 0.04 mg/ml -0.1 -0.0 +0.7 -3.8 -3.1
stress Def Chlorate 20 mM +0.1 -0.5 +0.1 -3.3 -2.8
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.5 -0.2 -0.8 -3.3 -1.6
stress Def Doxycycline hyclate 0.0002 mg/ml +0.2 -0.4 +0.3 -4.5 -1.9
carbon source RCH2 defined media +0.6 -0.0 -0.0 -4.2 -2.4
nitrogen source L-Alanine (N) -0.3 +0.1 +0.3 -3.1 -2.7
nitrogen source D-Alanine (N) +0.5 -0.1 -0.0 -3.8 -2.0
carbon source L-Proline (C) +0.2 +0.5 +0.5 -3.0 -3.6
RCH2 grown on a colony of N2A2 -0.6 +0.5 -0.6 -3.9 -0.9
temperature Glucose defined 30C timecourse1 timepoint 3 +0.5 +0.7 +0.5 -4.6 -2.4
stress Def Neomycin 0.0002 mg/ml -0.2 +0.6 +0.1 -3.2 -2.4
carbon source D-Lactate (C) -0.3 +0.1 +0.5 -3.2 -2.2
nitrogen source nitrite (N) +0.7 -0.8 +0.0 -3.0 -1.8
carbon source RCH2 defined media +0.3 -0.4 +0.4 -3.0 -2.2
RCH2 grown on a colony of N2A2 +1.1 -0.3 -0.3 -3.6 -1.6
stress Def 2-Furfuraldehyde 0.032 vol% +0.9 +1.0 +0.4 -3.4 -3.5
stress Choline Lysine 20 mM +0.7 +0.4 -0.3 -2.2 -2.8
stress Def Carbenicillin 0.008 mg/ml +1.3 -0.1 +0.1 -3.6 -1.3
stress Def Benzalkonium Chloride 0.002 mg/ml +1.5 -0.2 +0.3 -2.8 -2.1
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