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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_4157 and Psest_4158 are separated by 54 nucleotides
Psest_4158 and Psest_4159 overlap by 4 nucleotides
Psest_4159 and Psest_4160 are separated by 4 nucleotides
Psest_4160 and Psest_4161 are separated by 11 nucleotides
Psest_4157: Psest_4157 - hypothetical protein, at 4,338,960 to 4,339,442
_4157
Psest_4158: Psest_4158 - Flagellar motor protein, at 4,339,497 to 4,340,435
_4158
Psest_4159: Psest_4159 - flagellar motor stator protein MotA, at 4,340,432 to 4,341,304
_4159
Psest_4160: Psest_4160 - RNA polymerase sigma factor, FliA/WhiG family, at 4,341,309 to 4,342,043
_4160
Psest_4161: Psest_4161 - Flagellar basal body-associated protein, at 4,342,055 to 4,342,504
_4161
Group
Condition
Psest
_4157
Psest
_4158
Psest
_4159
Psest
_4160
Psest
_4161
RCH2 grown on a colony of ecoli
-0.9
-0.8
+0.3
-1.2
-0.6
carbon source
D-Gluconic Acid (C)
+0.3
-2.7
+0.1
+0.2
-0.0
nitrogen source
L-Glutamic (N)
+0.4
-2.8
-0.2
+0.2
+0.3
stress
Carbenicillin 0.0065 mg/ml
-0.5
-1.0
+0.1
-0.4
-0.3
stress
Carbenicillin 0.008 mg/ml
-0.7
-0.7
+0.0
+0.1
-0.7
stress
Nickel (II) chloride 0.75 mM
-0.3
-1.0
-0.4
+0.3
-0.6
stress
methylglyoxal 0.0016 vol%
-0.2
-0.8
+0.2
-0.2
-0.8
stress
Furfuryl Alcohol 0.05 vol%
+0.4
-1.3
-0.2
+0.1
-0.6
stress
Carbenicillin 0.008 mg/ml
-0.9
-0.9
-0.1
-0.2
+0.6
radiation
Ionizing radiation, 319.06 Gy,
-0.5
-0.8
-0.4
-0.1
+0.5
nitrogen source
nitrite (N)
+0.6
-0.1
-1.0
-0.5
-0.0
stress
Cisplatin 0.0016 mg/ml
-0.2
+1.1
-0.3
+0.1
-1.4
stress
Choline chloride 90 mM
-0.8
-0.4
+0.1
-0.4
+0.7
stress
Lactate-nitrate; anaerobic; nickel stress sample2
-0.3
-0.4
-0.4
+1.0
-0.4
stress
Bacitracin 0.25 mg/ml
+0.3
-1.5
+0.2
+0.1
+0.5
stress
Benzethonium chloride 0.0125 mM
-0.5
-0.9
-0.1
+0.5
+0.7
stress
Paraquat dichloride 0.015 mg/ml
-0.2
-0.9
+0.4
-0.3
+0.7
stress
syringaldehyde 3 mM
+0.3
+0.8
-0.2
-0.2
-0.9
RCH2 grown on a colony of 8R2A
-0.9
+0.6
+0.0
+0.4
-0.3
stress
Lactate-nitrate; anaerobic; dichromate stress sample3
+0.2
+0.6
-0.6
+0.4
-0.6
stress
Lactate-nitrate; anaerobic sample1
-0.3
+0.4
-0.4
+0.7
-0.4
stress
Cephalothin 0.04 mg/ml
+0.3
+0.3
-1.4
+0.3
+0.6
stress
Cisplatin 0.0016 mg/ml
-0.3
+1.6
-0.5
-0.1
-0.3
RCH2 grown on a colony of N2C3
-0.4
+0.6
+0.5
-0.7
+0.4
stress
Lactate-nitrate; anaerobic; cobalt stress sample2
-0.4
+0.3
-0.3
+0.5
+0.7
stress
Lactate-nitrate; anaerobic; cobalt stress sample3
+0.2
+1.3
-0.2
+0.2
-0.6
metal limitation
Lactate-nitrite; anaerobic; with copper; sample1
+0.0
+0.9
-0.3
+0.6
-0.3
lb
LB
+0.0
+1.0
-0.1
-0.4
+0.7
stress
Def 2-Furfuraldehyde 0.032 vol%
+0.9
+0.3
-0.4
+0.2
+0.6
stress
Nickel (II) chloride 0.8 mM
+0.2
+0.5
+0.4
+0.8
-0.3
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