Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_4142 and Psest_4143 are separated by 16 nucleotidesPsest_4143 and Psest_4144 are separated by 37 nucleotidesPsest_4144 and Psest_4145 overlap by 4 nucleotidesPsest_4145 and Psest_4146 are separated by 8 nucleotides Psest_4142: Psest_4142 - hypothetical protein, at 4,325,340 to 4,326,377 _4142 Psest_4143: Psest_4143 - flagellar hook-associated protein 3, at 4,326,394 to 4,327,302 _4143 Psest_4144: Psest_4144 - flagellar hook-associated protein FlgK, at 4,327,340 to 4,328,719 _4144 Psest_4145: Psest_4145 - Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains), at 4,328,716 to 4,329,828 _4145 Psest_4146: Psest_4146 - Flagellar basal-body P-ring protein, at 4,329,837 to 4,330,949 _4146
Group Condition Psest_4142 Psest_4143 Psest_4144 Psest_4145 Psest_4146
stress Def Cephalothin 0.08 mg/ml -2.8 -0.1 -0.2 -1.7 -0.6
temperature LB 30C timecourse2 timepoint 1 -3.8 -0.0 -0.2 +0.2 -0.1
RCH2 grown on a colony of N2C3 -1.9 -0.4 -0.4 -1.1 +0.1
temperature LB 26C sample1 -2.3 +0.1 -0.2 -0.6 -0.6
nutrient L-tyrosine -2.6 +0.0 +0.2 -0.5 -0.6
stress Cobalt chloride 0.07 mM -1.9 -0.2 -0.7 -0.6 -0.0
stress Choline chloride 90 mM -3.3 +0.5 +0.2 -0.0 -0.5
stress Thallium(I) acetate 0.1 mg/ml -2.5 -0.4 +0.2 -0.7 +0.2
stress Furfuryl Alcohol 0.05 vol% -2.8 -0.8 -0.3 +1.1 -0.3
stress nitrite 2.5 mM -1.6 -0.2 -0.1 -0.9 -0.2
stress Vanillin 2 mM -2.2 -0.4 +0.5 -0.3 -0.1
stress Def Cephalothin 0.04 mg/ml -1.9 +0.1 +0.1 -0.9 +0.1
stress Nalidixic 0.00390625 mg/ml -1.7 -0.2 -0.4 +0.2 -0.4
stress Nickel (II) chloride 1 mM -2.3 +0.3 -0.3 -0.1 -0.0
radiation Ionizing radiation, 319.06 Gy, -2.3 +0.2 -0.5 +0.8 -0.3
vitamin With vitamins t2 -1.8 -0.1 -0.2 -0.4 +0.4
RCH2 grown on a colony of 8R2A -0.9 +0.4 -0.6 -0.5 -0.6
RCH2 grown on a colony of Serratia -3.1 -0.2 +0.3 +0.2 +0.7
stress Fusidic 0.016 mg/ml -1.7 +0.1 -0.4 +0.6 -0.7
RCH2 grown on a colony of N2A2 -2.2 -0.0 +0.4 -0.7 +0.5
stress Thallium(I) acetate 0.08 mg/ml -1.6 -0.6 -0.1 +0.5 -0.2
stress Carbenicillin 0.008 mg/ml -2.6 +0.1 +0.1 +0.2 +0.4
stress Carbenicillin 0.008 mg/ml -1.1 +0.2 +0.4 -1.1 +0.1
stress nitrate 200 mM -2.5 +0.0 -0.3 +1.0 +0.4
stress Def A22 0.015 mg/ml +1.0 -0.3 -0.4 -1.0 -0.4
stress Bacitracin 0.25 mg/ml -1.7 -0.2 -0.1 +0.8 +0.3
stress Def Thallium(I) acetate 0.125 mg/ml -2.1 +0.2 +0.3 +0.5 +0.7
nitrogen source L-Isoleucine (N) +2.2 -0.1 -0.2 -0.2 -0.3
stress Cephalothin 0.04 mg/ml +2.2 +0.4 -0.1 -0.7 +0.0
RCH2 grown on a colony of N2F3 +2.1 +0.3 -0.3 -0.2 +0.5
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