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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_4134 and Psest_4135 are separated by 88 nucleotides
Psest_4135 and Psest_4136 are separated by 292 nucleotides
Psest_4136 and Psest_4137 overlap by 1 nucleotides
Psest_4137 and Psest_4138 overlap by 4 nucleotides
Psest_4134: Psest_4134 - Uncharacterized protein conserved in bacteria, at 4,315,355 to 4,315,711
_4134
Psest_4135: Psest_4135 - Ketosteroid isomerase homolog, at 4,315,800 to 4,316,258
_4135
Psest_4136: Psest_4136 - TonB-dependent siderophore receptor, at 4,316,551 to 4,318,764
_4136
Psest_4137: Psest_4137 - Uncharacterized iron-regulated membrane protein, at 4,318,764 to 4,319,891
_4137
Psest_4138: Psest_4138 - hypothetical protein, at 4,319,888 to 4,320,109
_4138
Group
Condition
Psest
_4134
Psest
_4135
Psest
_4136
Psest
_4137
Psest
_4138
RCH2 grown on a colony of N2F3
-3.4
-0.3
-0.0
+0.2
N.D.
stress
Thallium(I) acetate 0.08 mg/ml
-3.0
-0.1
+0.0
-0.1
N.D.
stress
Def Vancomycin 0.016 mg/ml
-2.5
-0.4
+0.1
-0.1
N.D.
RCH2 grown on a colony of N2F3
-1.1
-1.2
-0.2
-0.2
N.D.
vitamin
No vitamins t1
-2.4
+0.1
-0.1
-0.1
N.D.
vitamin
With vitamins t1
-1.6
-0.3
-0.2
-0.4
N.D.
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-1.7
-0.8
-0.3
+0.4
N.D.
stress
A22 0.005 mg/ml
-1.0
-0.9
-0.1
-0.1
N.D.
carbon source
propionate (C)
-2.1
+0.3
-0.1
-0.0
N.D.
nitrogen source
nitrite (N)
+0.3
-1.2
-0.5
-0.5
N.D.
radiation
Ionizing radiation, 319.06 Gy,
-1.7
-0.4
+0.1
+0.2
N.D.
stress
Fusidic 0.016 mg/ml
-0.8
-0.5
+0.1
-0.5
N.D.
carbon source
L-Alanine (C)
-1.0
+0.3
-0.0
-0.7
N.D.
stress
Fusidic 0.016 mg/ml
-1.7
+0.3
-0.0
+0.1
N.D.
stress
Def Chlorate 20 mM
-1.8
+0.2
+0.1
+0.5
N.D.
stress
Def 2-Furfuraldehyde 0.032 vol%
-1.7
+0.1
-0.3
+1.0
N.D.
stress
Cobalt chloride 0.06 mM
-1.4
+0.4
+0.0
+0.2
N.D.
stress
nitrate 250 mM
+0.8
-1.1
-0.2
-0.2
N.D.
lb
LB
+0.7
-0.3
-0.3
-0.6
N.D.
lb
LB
+0.9
-0.6
-0.1
+0.2
N.D.
stress
Cephalothin 0.04 mg/ml
+1.2
-0.5
-0.3
+0.0
N.D.
RCH2 grown on a colony of Serratia
+0.5
-0.9
+0.1
+0.7
N.D.
nitrogen source
L-Glutamic (N)
+1.3
-0.0
-0.1
-0.5
N.D.
stress
2-Furfuraldehyde 0.05 vol%
+1.4
+0.2
-0.1
-0.3
N.D.
stress
methylglyoxal 0.0016 vol%
+2.0
-0.2
-0.1
-0.2
N.D.
stress
nitrate 200 mM
+1.8
-0.0
+0.1
-0.2
N.D.
stress
Carbenicillin 0.008 mg/ml
+1.4
+0.1
-0.0
+0.4
N.D.
stress
syringaldehyde 4 mM
+1.5
+0.1
+0.1
+0.2
N.D.
stress
Benzethonium chloride 0.01 mM
+1.1
+0.3
-0.0
+0.5
N.D.
stress
Def Chlorate 40 mM
+0.7
+0.7
+0.1
+0.8
N.D.
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