Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0403 and Psest_0404 overlap by 4 nucleotidesPsest_0404 and Psest_0405 overlap by 4 nucleotidesPsest_0405 and Psest_0406 overlap by 41 nucleotidesPsest_0406 and Psest_0407 are separated by 83 nucleotides Psest_0403: Psest_0403 - lycopene cyclase, at 438,067 to 439,236 _0403 Psest_0404: Psest_0404 - phytoene desaturase, at 439,233 to 440,738 _0404 Psest_0405: Psest_0405 - Phytoene/squalene synthetase, at 440,735 to 441,661 _0405 Psest_0406: Psest_0406 - Fatty acid hydroxylase superfamily., at 441,621 to 442,154 _0406 Psest_0407: Psest_0407 - Dioxygenases related to 2-nitropropane dioxygenase, at 442,238 to 443,281 _0407
Group Condition Psest_0403 Psest_0404 Psest_0405 Psest_0406 Psest_0407
stress Def Carbenicillin 0.02 mg/ml -0.2 -0.4 -0.2 -0.2 -1.7
stress Def Phosphomycin 0.125 mg/ml -0.7 -0.4 -0.7 -0.7 +0.2
stress Def Carbenicillin 0.008 mg/ml -0.5 -0.5 -0.9 -0.8 +0.6
nitrogen source L-Alanine (N) -0.4 -0.2 -0.4 -0.2 -0.4
stress Def A22 0.015 mg/ml -0.3 -0.2 -0.3 -0.4 -0.5
stress Furfuryl Alcohol 0.05 vol% -0.4 +0.1 -0.4 +0.3 -1.2
nitrogen source L-Isoleucine (N) -0.2 -0.4 -0.7 -0.7 +0.5
RCH2 grown on a colony of 8R2A -0.4 +0.3 -0.4 -0.4 -0.3
nitrogen source Cytosine (N) -0.5 -0.2 -0.5 -0.3 +0.3
nitrogen source nitrite (N) -0.5 -0.3 -0.1 -0.3 +0.3
RCH2 grown on a colony of N2C3 -0.8 +0.1 +0.5 -0.2 -0.4
stress Carbenicillin 0.0065 mg/ml -0.1 -0.2 -0.4 -0.3 +0.4
nitrogen source L-Citrulline (N) -0.2 +0.2 -0.2 +0.4 -0.5
vitamin With vitamins t1 +0.3 -0.1 -0.3 -0.5 +0.3
carbon source butyrate (C) -0.5 -0.1 -0.2 -0.0 +0.8
stress Spectinomycin 0.00625 mg/ml -0.2 -0.2 +0.5 +0.2 -0.3
stress Def sodium fluoride 25 mM +0.2 -0.1 +0.4 +0.0 -0.6
nitrogen source D-Alanine (N) -0.1 +0.3 +0.3 +0.1 -0.5
stress Cobalt chloride 0.08 mM -0.3 +0.2 -0.2 +0.1 +0.5
stress Cephalothin 0.04 mg/ml -0.2 +0.2 -0.4 +0.0 +0.6
RCH2 grown on a colony of N2A2 -0.1 -0.2 -0.3 +0.3 +0.6
stress Polymyxin B sulfate 0.0001 mg/ml +0.1 +0.4 +0.2 +0.4 -0.6
stress Choline chloride 90 mM +0.5 +0.0 -0.4 +0.3 +0.3
stress Benzalkonium Chloride 0.002 mg/ml -0.1 +0.3 -0.1 +0.6 +0.3
temperature Glucose defined media 37C sample1 +0.3 +0.2 +0.6 +0.3 -0.2
carbon source propionate (C) +0.0 +0.5 +0.7 +0.0 -0.1
stress Dimethyl Sulfoxide 5 vol% -0.1 +0.2 +0.6 +0.4 +0.2
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.1 +0.0 +0.2 +0.4 +0.7
stress Def Thallium(I) acetate 0.125 mg/ml +0.3 +0.4 +0.4 +0.1 +0.2
stress Chlorate 75 mM +0.3 +0.6 +0.5 +0.8 +0.7
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