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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_4095 and Psest_4096 are separated by 125 nucleotides
Psest_4096 and Psest_4097 are separated by 33 nucleotides
Psest_4097 and Psest_4098 are separated by 251 nucleotides
Psest_4098 and Psest_4099 are separated by 56 nucleotides
Psest_4095: Psest_4095 - Uncharacterized protein conserved in bacteria, at 4,271,876 to 4,272,094
_4095
Psest_4096: Psest_4096 - Collagenase and related proteases, at 4,272,220 to 4,273,593
_4096
Psest_4097: Psest_4097 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 4,273,627 to 4,276,479
_4097
Psest_4098: Psest_4098 - Superfamily I DNA and RNA helicases, at 4,276,731 to 4,278,920
_4098
Psest_4099: Psest_4099 - TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component, at 4,278,977 to 4,280,080
_4099
Group
Condition
Psest
_4095
Psest
_4096
Psest
_4097
Psest
_4098
Psest
_4099
carbon source
L-Glutamine (C)
-0.8
-0.1
-3.3
-0.8
-0.2
carbon source
L-Glutamine (C)
-0.7
-0.0
-2.5
-1.0
-0.2
carbon source
butyrate (C)
-0.1
-0.0
-2.9
-0.9
-0.4
stress
Carbenicillin 0.008 mg/ml
-1.2
-0.0
-0.0
-2.2
-0.8
stress
Def Carbenicillin 0.02 mg/ml
+0.2
-0.3
-0.8
-2.3
-1.0
stress
Cisplatin 0.003 mg/ml
-0.0
+0.1
+0.0
-3.2
-0.8
stress
Def Chloride 400 mM
-0.5
-0.4
-0.5
-0.3
-2.0
carbon source
D-Maltose (C)
-0.8
+0.1
-1.8
-1.4
+0.1
stress
Def A22 0.015 mg/ml
+0.0
-0.1
-0.3
-1.7
-1.8
carbon source
L-Glutamic (C)
-0.8
-0.1
-1.3
-1.4
-0.1
stress
Def methylglyoxal 0.01 vol%
-0.2
-0.1
-0.5
-2.8
-0.0
carbon source
butyrate (C)
-0.8
+0.0
-2.5
+0.1
-0.5
temperature
LB 30C timecourse1 timepoint 2
-0.5
-0.1
-0.0
-2.4
-0.6
carbon source
L-Glutamine (C)
-0.1
-0.2
-3.1
+0.2
-0.3
temperature
LB 30C timecourse1 timepoint 3
-0.1
-0.2
-0.3
-2.2
-0.6
stress
Chloride 200 mM
-0.7
-0.2
-0.5
-1.7
-0.4
carbon source
D-Maltose (C)
+0.4
-0.1
-2.2
-1.6
-0.0
carbon source
L-Leucine (C)
-0.6
-0.1
-1.7
-0.7
-0.1
stress
Def Carbenicillin 0.008 mg/ml
+0.3
-0.5
-1.0
-1.6
-0.4
stress
Paraquat dichloride 0.015 mg/ml
-0.3
-0.4
-0.5
-2.1
+0.1
stress
Cisplatin 0.003 mg/ml
-0.2
+0.1
-0.3
-2.0
-0.7
stress
Choline chloride 90 mM
+0.3
+0.1
-0.3
-1.3
-1.7
stress
Def Neomycin 0.0008 mg/ml
+0.1
-0.1
-0.4
-0.9
-1.8
stress
Carbenicillin 0.008 mg/ml
-1.1
+0.2
+0.2
-1.3
-0.9
stress
Choline chloride 90 mM
-0.6
+0.3
-0.1
-0.6
-1.9
carbon source
D-Maltose (C)
+0.4
-0.0
-1.6
-1.6
+0.1
stress
nitrate 250 mM
+1.0
-0.3
-1.0
-2.2
-0.2
carbon source
butyrate (C)
+0.4
-0.2
-2.7
+1.1
-0.5
stress
Def 2-Furfuraldehyde 0.032 vol%
+0.3
-0.3
-1.4
+1.1
+0.2
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.7
+0.0
-2.5
+1.4
+0.2
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