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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_0401 and Psest_0402 are separated by 20 nucleotides
Psest_0402 and Psest_0403 overlap by 11 nucleotides
Psest_0403 and Psest_0404 overlap by 4 nucleotides
Psest_0404 and Psest_0405 overlap by 4 nucleotides
Psest_0401: Psest_0401 - isopentenyl-diphosphate delta-isomerase, type 2, at 435,730 to 436,770
_0401
Psest_0402: Psest_0402 - glycosyltransferase, MGT family, at 436,791 to 438,077
_0402
Psest_0403: Psest_0403 - lycopene cyclase, at 438,067 to 439,236
_0403
Psest_0404: Psest_0404 - phytoene desaturase, at 439,233 to 440,738
_0404
Psest_0405: Psest_0405 - Phytoene/squalene synthetase, at 440,735 to 441,661
_0405
Group
Condition
Psest
_0401
Psest
_0402
Psest
_0403
Psest
_0404
Psest
_0405
carbon source
D-Gluconic Acid (C)
-0.7
-3.2
-0.1
-0.0
-0.2
stress
methylglyoxal 0.0016 vol%
-1.4
-1.8
-0.3
-0.1
-0.3
stress
Def Cephalothin 0.08 mg/ml
-1.4
-1.7
-0.0
-0.3
-0.0
RCH2 grown on a colony of Serratia
-1.7
-0.3
-0.2
+0.1
-0.7
stress
Vanillin 2 mM
+0.3
-2.3
-0.2
-0.4
-0.2
stress
Benzethonium chloride 0.0125 mM
-2.6
-0.3
+0.1
+0.1
+0.3
stress
Def Carbenicillin 0.008 mg/ml
-1.3
+1.1
-0.5
-0.5
-0.9
RCH2 grown on a colony of 8R2A
-2.5
+0.9
-0.4
+0.3
-0.4
stress
Cisplatin 0.003 mg/ml
-1.9
+0.1
-0.1
-0.2
+0.5
stress
Paraquat dichloride 0.015 mg/ml
-2.0
+0.6
-0.3
+0.1
+0.1
nitrogen source
D-Alanine (N)
-1.3
-0.6
-0.1
+0.3
+0.3
stress
Furfuryl Alcohol 0.3 vol%
-1.6
+1.0
-0.2
+0.1
+0.0
stress
Dimethyl Sulfoxide 5 vol%
-1.8
+1.0
+0.1
+0.0
+0.1
stress
Cisplatin 0.0016 mg/ml
-1.2
+1.0
-0.3
+0.0
+0.3
RCH2 grown on a colony of Serratia
+1.2
-1.3
-0.0
-0.1
-0.2
stress
Bacitracin 0.25 mg/ml
-1.3
+0.9
+0.2
+0.2
+0.3
RCH2 grown on a colony of ecoli
+1.9
-1.6
-0.1
+0.1
-0.0
carbon source
butyrate (C)
+1.1
+0.9
-0.5
-0.1
-0.2
stress
nitrate 250 mM
+1.7
-0.8
-0.1
+0.2
+0.2
stress
Nickel (II) chloride 0.8 mM
+1.1
+1.0
-0.1
-0.3
-0.2
nitrogen source
Adenine (N)
+1.7
+0.7
-0.1
+0.1
-0.0
stress
Def Chlorate 20 mM
+2.3
+0.3
-0.2
+0.1
-0.1
carbon source
propionate (C)
+2.2
-0.6
+0.0
+0.5
+0.7
stress
Def Chlorate 40 mM
+2.4
+0.7
-0.1
+0.3
+0.0
stress
Def Cisplatin 0.0002 mg/ml
+3.0
+0.4
-0.1
+0.2
+0.0
stress
Def sodium fluoride 25 mM
+3.2
+0.4
+0.2
-0.1
+0.4
stress
Def Neomycin 0.0008 mg/ml
+1.7
+1.6
+0.0
+0.6
+0.2
stress
Chlorate 75 mM
+1.2
+2.1
+0.3
+0.6
+0.5
stress
Def Chloride 400 mM
+2.3
+1.8
+0.0
+0.4
+0.4
stress
Def Thallium(I) acetate 0.125 mg/ml
+3.8
+1.7
+0.3
+0.4
+0.4
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