Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_4088 and Psest_4089 are separated by 141 nucleotidesPsest_4089 and Psest_4090 are separated by 551 nucleotidesPsest_4090 and Psest_4091 overlap by 4 nucleotidesPsest_4091 and Psest_4092 are separated by 10 nucleotides Psest_4088: Psest_4088 - Transcriptional regulators, at 4,263,879 to 4,264,745 _4088 Psest_4089: Psest_4089 - glucose-6-phosphate 1-dehydrogenase, at 4,264,887 to 4,266,329 _4089 Psest_4090: Psest_4090 - diaminobutyrate acetyltransferase, at 4,266,881 to 4,267,462 _4090 Psest_4091: Psest_4091 - diaminobutyrate--2-oxoglutarate aminotransferase, at 4,267,459 to 4,268,736 _4091 Psest_4092: Psest_4092 - Ectoine synthase., at 4,268,747 to 4,269,148 _4092
Group Condition Psest_4088 Psest_4089 Psest_4090 Psest_4091 Psest_4092
temperature Glucose defined 30C timecourse1 timepoint 2 -4.2 -0.1 +0.0 +0.1 -0.2
stress Def Chloride 400 mM +0.3 -0.5 -1.6 -1.0 -1.1
nutrient L-Histidine -2.7 -0.2 -0.6 -0.1 -0.3
carbon source D-Glucose (C) -3.9 -0.0 +0.0 +0.1 +0.1
carbon source propionate (C) -2.8 -0.5 -0.5 +0.2 -0.1
temperature Glucose defined 30C timecourse1 timepoint 1 -3.6 -0.0 +0.1 -0.0 -0.0
temperature Glucose defined 30C timecourse1 timepoint 3 -3.9 -0.0 +0.2 +0.1 -0.0
vitamin With vitamins t2 -2.7 +0.0 -0.5 -0.3 -0.0
stress D-Cycloserine 0.032 mg/ml -3.5 +0.2 -0.1 +0.0 +0.0
nutrient Min media with glucose -2.5 +0.0 -0.3 -0.4 -0.1
carbon source Glucose defined media -3.0 +0.1 +0.1 -0.0 -0.3
carbon source Glucose defined media -3.2 +0.0 +0.3 -0.0 -0.2
carbon source D-Gluconic Acid (C) -3.1 -0.0 +0.0 +0.1 +0.0
temperature Glucose defined media 26C sample1 -2.7 -0.2 +0.4 +0.1 -0.4
stress L-Lysine 200 mM +0.3 -0.4 -0.7 -1.1 -1.0
carbon source D-Glucose (C) -2.8 -0.1 +0.2 -0.0 +0.0
nutrient L-Histidine -2.3 -0.1 +0.2 -0.2 -0.2
stress D-Cycloserine 0.032 mg/ml -2.3 +0.2 -0.5 +0.0 +0.0
carbon source D-Gluconic Acid (C) -3.1 -0.1 +0.3 +0.2 +0.2
carbon source D-Maltose (C) -3.2 +0.2 +0.4 +0.0 +0.2
stress benzoic 0.4 mg/ml -2.2 +0.4 -0.6 +0.0 +0.1
stress Chloride 200 mM -1.6 +0.3 -1.0 -0.1 +0.1
carbon source D-Maltose (C) -2.9 +0.3 +0.3 +0.1 +0.2
vitamin No vitamins t2 -2.4 +0.0 +0.2 -0.0 +0.3
stress Bacitracin 0.25 mg/ml -1.4 +0.3 -1.0 +0.4 +0.1
RCH2 grown on a colony of N2C3 -0.7 +0.2 +1.6 +0.6 +0.0
carbon source D-Fructose (C) +2.7 -0.5 -0.4 +0.1 -0.0
carbon source D-Fructose (C) +2.9 -0.9 +0.2 +0.1 +0.0
stress Phosphomycin 0.012 mg/ml +4.1 -0.1 -0.1 +0.1 -0.2
stress Phosphomycin 0.012 mg/ml +4.1 +0.2 -0.2 -0.2 +0.0
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