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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_4081 and Psest_4082 are separated by 64 nucleotides
Psest_4082 and Psest_4083 are separated by 1 nucleotides
Psest_4083 and Psest_4084 are separated by 196 nucleotides
Psest_4084 and Psest_4085 are separated by 10 nucleotides
Psest_4081: Psest_4081 - Glutaminase (EC 3.5.1.2)
(from data)
, at 4,256,772 to 4,257,680
_4081
Psest_4082: Psest_4082 - hypothetical protein, at 4,257,745 to 4,258,047
_4082
Psest_4083: Psest_4083 - Predicted permease, at 4,258,049 to 4,258,990
_4083
Psest_4084: Psest_4084 - oxaloacetate decarboxylase alpha subunit, at 4,259,187 to 4,260,995
_4084
Psest_4085: Psest_4085 - Biotin carboxylase, at 4,261,006 to 4,262,421
_4085
Group
Condition
Psest
_4081
Psest
_4082
Psest
_4083
Psest
_4084
Psest
_4085
nitrogen source
nitrite (N)
-0.3
+0.9
-5.2
-4.5
-4.9
nitrogen source
nitrite (N)
+0.2
+0.9
-4.9
-4.8
-4.9
temperature
Glucose defined 30C timecourse1 timepoint 3
+0.2
-0.5
-0.4
-5.3
-5.3
carbon source
L-tyrosine (C)
-0.1
+0.3
-4.6
-3.4
-3.3
nitrogen source
L-Alanine (N)
-0.4
+0.7
-1.3
-4.6
-5.0
carbon source
L-tyrosine (C)
+0.2
-0.0
-4.7
-2.7
-3.0
nitrogen source
L-Alanine (N)
+0.0
+0.4
-1.1
-4.4
-4.4
nitrogen source
nitrate (N)
-0.2
+0.3
-0.9
-4.4
-4.2
stress
Def Chlorate 40 mM
-0.1
-0.4
-0.8
-3.5
-4.2
stress
Def Cisplatin 0.0002 mg/ml
-0.3
-0.1
-0.4
-4.2
-4.0
stress
Def Chloride 400 mM
-0.2
+0.3
-1.0
-3.7
-4.2
carbon source
D-Lactate (C)
-0.2
-0.3
-0.8
-3.5
-3.8
nutrient
L-Histidine
-0.4
-0.1
-0.3
-3.9
-4.1
carbon source
D,L-Lactate (C)
-0.4
-0.0
-0.9
-3.5
-3.8
carbon source
D-Fructose (C)
-0.1
-1.1
-0.1
-3.7
-3.4
nutrient
L-Histidine
+0.0
-0.9
-0.1
-3.5
-3.8
stress
Def 2-Furfuraldehyde 0.032 vol%
+0.2
+1.6
-1.6
-4.0
-4.4
carbon source
D-Lactate (C)
+0.1
-0.3
-0.7
-3.8
-3.4
nitrogen source
nitrite (N)
-0.2
+1.7
-4.5
-2.4
-2.9
nitrogen source
nitrate (N)
+0.2
+0.8
-0.8
-4.2
-4.1
temperature
Glucose defined 30C timecourse1 timepoint 2
+0.5
-0.4
-0.2
-3.8
-4.2
stress
Def Cephalothin 0.04 mg/ml
-0.2
+0.5
-0.6
-3.9
-3.8
nitrogen source
Ammonium chloride (N)
-0.1
+0.4
-0.9
-3.6
-3.5
stress
Def Benzethonium chloride 0.008 mM
-0.0
+1.6
-1.8
-3.6
-3.7
nitrogen source
nitrite (N)
+0.1
+1.7
-3.9
-2.1
-2.3
nitrogen source
L-Alanine (N)
+0.2
+0.8
-0.2
-3.9
-3.2
carbon source
L-Lactate (C)
-0.1
+0.9
-1.1
-3.3
-2.9
stress
Choline Lysine 20 mM
+0.3
+1.4
-6.3
+0.1
-0.0
carbon source
propionate (C)
-1.0
+7.0
-1.5
-3.4
-4.2
carbon source
propionate (C)
-0.5
+8.6
-1.7
-3.1
-3.5
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