Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_4081 and Psest_4082 are separated by 64 nucleotidesPsest_4082 and Psest_4083 are separated by 1 nucleotidesPsest_4083 and Psest_4084 are separated by 196 nucleotidesPsest_4084 and Psest_4085 are separated by 10 nucleotides Psest_4081: Psest_4081 - Glutaminase (EC 3.5.1.2) (from data), at 4,256,772 to 4,257,680 _4081 Psest_4082: Psest_4082 - hypothetical protein, at 4,257,745 to 4,258,047 _4082 Psest_4083: Psest_4083 - Predicted permease, at 4,258,049 to 4,258,990 _4083 Psest_4084: Psest_4084 - oxaloacetate decarboxylase alpha subunit, at 4,259,187 to 4,260,995 _4084 Psest_4085: Psest_4085 - Biotin carboxylase, at 4,261,006 to 4,262,421 _4085
Group Condition Psest_4081 Psest_4082 Psest_4083 Psest_4084 Psest_4085
nitrogen source nitrite (N) -0.3 +0.9 -5.2 -4.5 -4.9
nitrogen source nitrite (N) +0.2 +0.9 -4.9 -4.8 -4.9
temperature Glucose defined 30C timecourse1 timepoint 3 +0.2 -0.5 -0.4 -5.3 -5.3
carbon source L-tyrosine (C) -0.1 +0.3 -4.6 -3.4 -3.3
nitrogen source L-Alanine (N) -0.4 +0.7 -1.3 -4.6 -5.0
carbon source L-tyrosine (C) +0.2 -0.0 -4.7 -2.7 -3.0
nitrogen source L-Alanine (N) +0.0 +0.4 -1.1 -4.4 -4.4
nitrogen source nitrate (N) -0.2 +0.3 -0.9 -4.4 -4.2
stress Def Chlorate 40 mM -0.1 -0.4 -0.8 -3.5 -4.2
stress Def Cisplatin 0.0002 mg/ml -0.3 -0.1 -0.4 -4.2 -4.0
stress Def Chloride 400 mM -0.2 +0.3 -1.0 -3.7 -4.2
carbon source D-Lactate (C) -0.2 -0.3 -0.8 -3.5 -3.8
nutrient L-Histidine -0.4 -0.1 -0.3 -3.9 -4.1
carbon source D,L-Lactate (C) -0.4 -0.0 -0.9 -3.5 -3.8
carbon source D-Fructose (C) -0.1 -1.1 -0.1 -3.7 -3.4
nutrient L-Histidine +0.0 -0.9 -0.1 -3.5 -3.8
stress Def 2-Furfuraldehyde 0.032 vol% +0.2 +1.6 -1.6 -4.0 -4.4
carbon source D-Lactate (C) +0.1 -0.3 -0.7 -3.8 -3.4
nitrogen source nitrite (N) -0.2 +1.7 -4.5 -2.4 -2.9
nitrogen source nitrate (N) +0.2 +0.8 -0.8 -4.2 -4.1
temperature Glucose defined 30C timecourse1 timepoint 2 +0.5 -0.4 -0.2 -3.8 -4.2
stress Def Cephalothin 0.04 mg/ml -0.2 +0.5 -0.6 -3.9 -3.8
nitrogen source Ammonium chloride (N) -0.1 +0.4 -0.9 -3.6 -3.5
stress Def Benzethonium chloride 0.008 mM -0.0 +1.6 -1.8 -3.6 -3.7
nitrogen source nitrite (N) +0.1 +1.7 -3.9 -2.1 -2.3
nitrogen source L-Alanine (N) +0.2 +0.8 -0.2 -3.9 -3.2
carbon source L-Lactate (C) -0.1 +0.9 -1.1 -3.3 -2.9
stress Choline Lysine 20 mM +0.3 +1.4 -6.3 +0.1 -0.0
carbon source propionate (C) -1.0 +7.0 -1.5 -3.4 -4.2
carbon source propionate (C) -0.5 +8.6 -1.7 -3.1 -3.5
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