Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3995 and Psest_3996 are separated by 225 nucleotidesPsest_3996 and Psest_3997 are separated by 2 nucleotidesPsest_3997 and Psest_3998 are separated by 110 nucleotidesPsest_3998 and Psest_3999 are separated by 209 nucleotides Psest_3995: Psest_3995 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 4,164,251 to 4,164,985 _3995 Psest_3996: Psest_3996 - Transcriptional accessory protein, at 4,165,211 to 4,167,544 _3996 Psest_3997: Psest_3997 - uncharacterized domain 1, at 4,167,547 to 4,167,936 _3997 Psest_3998: Psest_3998 - glutamate--cysteine ligase, at 4,168,047 to 4,169,624 _3998 Psest_3999: Psest_3999 - Acetyl esterase (deacetylase), at 4,169,834 to 4,171,570 _3999
Group Condition Psest_3995 Psest_3996 Psest_3997 Psest_3998 Psest_3999
carbon source L-tyrosine (C) -4.7 +0.3 +0.2 -3.0 +0.2
nitrogen source L-Isoleucine (N) -2.4 -1.0 -1.1 -1.6 -0.3
carbon source L-tyrosine (C) -4.5 +0.6 +0.4 -2.6 -0.1
carbon source Fumarate (C) -0.8 -0.2 -0.5 -4.5 +0.1
carbon source L-Leucine (C) -0.2 +0.0 +0.0 -5.3 -0.1
carbon source D-Alanine (C) -0.5 -0.0 +0.0 -4.8 -0.1
carbon source L-Asparagine (C) -0.7 -0.1 -0.2 -4.4 -0.0
carbon source L-Isoleucine (C) -0.2 +0.0 -0.2 -4.8 -0.0
stress Def Benzethonium chloride 0.008 mM -0.3 -0.5 -0.7 -3.8 +0.2
stress Lactate-nitrate; anaerobic; copper stress sample1 -1.0 -0.3 -0.2 -3.7 +0.0
carbon source D-Alanine (C) +0.2 -0.2 +0.2 -5.3 +0.1
stress Choline Lysine 20 mM -6.5 +0.8 -0.4 +1.0 +0.1
carbon source D-Lactate (C) -0.2 -0.2 -0.2 -4.5 +0.0
carbon source Fumarate (C) -0.6 -0.0 -0.3 -4.1 +0.0
carbon source L-Malic (C) -0.4 -0.1 -0.2 -4.4 +0.1
carbon source L-Isoleucine (C) -0.3 -0.0 +0.1 -4.8 +0.1
carbon source D-Lactate (C) -0.7 +0.0 -0.2 -4.0 +0.1
carbon source L-Leucine (C) +0.6 +0.1 -0.2 -5.2 +0.0
carbon source Glycolic Acid (C) -0.2 +0.2 -0.2 -4.6 +0.1
stress Choline Lysine 20 mM -6.6 +1.1 -0.4 +1.3 -0.0
carbon source L-Malic (C) +0.5 +0.1 -0.1 -5.0 -0.0
nitrogen source nitrate (N) -0.2 -0.3 +0.2 -4.2 +0.1
carbon source Glycolic Acid (C) +0.3 +0.1 -0.2 -4.8 +0.1
carbon source L-Glutamic (C) -0.3 +0.2 +0.1 -4.5 +0.1
carbon source acetate (C) +0.3 -0.1 -0.2 -4.0 -0.3
carbon source L-Asparagine (C) +0.5 -0.2 -0.0 -4.3 +0.0
nitrogen source L-Proline (N) +1.0 +0.3 +0.7 -3.0 +0.2
stress nitrate 250 mM +3.0 +0.7 -0.3 -1.8 +0.2
stress Chlorate 75 mM -1.7 +0.5 -0.1 +3.0 +1.3
stress A22 0.005 mg/ml -0.8 -0.4 -0.3 +4.8 +0.2
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