Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3972 and Psest_3973 overlap by 4 nucleotidesPsest_3973 and Psest_3974 overlap by 4 nucleotidesPsest_3974 and Psest_3975 overlap by 8 nucleotidesPsest_3975 and Psest_3976 overlap by 11 nucleotides Psest_3972: Psest_3972 - Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor), at 4,140,216 to 4,140,578 _3972 Psest_3973: Psest_3973 - Anti-sigma regulatory factor (Ser/Thr protein kinase), at 4,140,575 to 4,140,979 _3973 Psest_3974: Psest_3974 - Anti-sigma regulatory factor (Ser/Thr protein kinase), at 4,140,976 to 4,141,986 _3974 Psest_3975: Psest_3975 - Signal transduction histidine kinase, at 4,141,979 to 4,142,851 _3975 Psest_3976: Psest_3976 - PAS domain S-box, at 4,142,841 to 4,144,787 _3976
Group Condition Psest_3972 Psest_3973 Psest_3974 Psest_3975 Psest_3976
carbon source propionate (C) N.D. -2.2 -0.1 -0.5 -0.2
stress L-Lysine 200 mM N.D. -2.0 -0.4 -0.2 -0.1
stress Carbenicillin 0.008 mg/ml N.D. -0.6 -0.8 -0.7 -0.2
stress sodium fluoride 8.5 mM N.D. -1.6 -0.6 -0.1 +0.1
RCH2 grown on a colony of N2F3 N.D. -1.3 -0.4 -0.2 -0.2
stress Def Chlorate 20 mM N.D. -1.6 -0.2 +0.1 -0.2
stress Def Chloride 400 mM N.D. -1.8 +1.0 +0.3 +0.1
RCH2 grown on a colony of N2A2 N.D. -0.8 +0.9 +0.5 +0.1
RCH2 grown on a colony of Serratia N.D. +1.6 -0.6 -0.0 -0.1
RCH2 grown on a colony of ecoli N.D. +1.7 +0.1 -0.2 +0.1
carbon source pyruvate (C) N.D. +0.7 +0.8 +0.3 +0.4
stress Def Polymyxin B sulfate 0.00008 mg/ml N.D. +0.6 +0.6 +0.4 +0.5
stress Gentamicin 0.0016 mg/ml N.D. +0.1 +0.7 +0.8 +0.6
nitrogen source Adenine (N) N.D. +0.9 +0.4 +0.5 +0.5
stress 2-Furfuraldehyde 0.05 vol% N.D. +1.4 +0.6 +0.2 +0.3
carbon source RCH2 defined media N.D. +0.5 +0.9 +0.5 +0.5
nitrogen source D-Alanine (N) N.D. +0.7 +0.8 +0.4 +0.5
radiation Ionizing radiation, 319.06 Gy, N.D. +1.0 +0.8 +0.3 +0.3
anaerobic nitrate reduction - anaerobic N.D. +0.3 +1.0 +0.7 +0.5
radiation Ionizing radiation, 0 Gy N.D. +0.4 +0.7 +0.8 +0.7
stress Fusidic 0.016 mg/ml N.D. +0.6 +0.9 +0.6 +0.8
stress nitrate 250 mM N.D. +0.6 +0.9 +0.8 +0.7
stress Def Benzethonium chloride 0.008 mM N.D. +1.0 +0.8 +0.7 +0.7
stress Def Carbenicillin 0.008 mg/ml N.D. +0.9 +1.1 +0.4 +0.8
nitrogen source nitrite (N) N.D. +1.0 +1.0 +0.7 +0.9
carbon source butyrate (C) N.D. +0.8 +1.4 +1.0 +1.1
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. +1.3 +1.5 +1.1 +1.0
nitrogen source nitrite (N) N.D. +1.3 +1.4 +1.1 +1.1
stress Def 2-Furfuraldehyde 0.032 vol% N.D. +1.3 +1.7 +1.2 +0.8
stress Cephalothin 0.04 mg/ml N.D. +1.5 +1.5 +1.2 +1.4
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