Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0388 and Psest_0389 overlap by 1 nucleotidesPsest_0389 and Psest_0390 are separated by 5 nucleotidesPsest_0390 and Psest_0391 are separated by 436 nucleotidesPsest_0391 and Psest_0392 are separated by 195 nucleotides Psest_0388: Psest_0388 - hypothetical protein, at 417,653 to 417,778 _0388 Psest_0389: Psest_0389 - hypothetical protein, at 417,778 to 417,975 _0389 Psest_0390: Psest_0390 - Short-chain dehydrogenases of various substrate specificities, at 417,981 to 418,973 _0390 Psest_0391: Psest_0391 - Uncharacterized homolog of Blt101, at 419,410 to 419,568 _0391 Psest_0392: Psest_0392 - Signal transduction histidine kinase, at 419,764 to 423,273 _0392
Group Condition Psest_0388 Psest_0389 Psest_0390 Psest_0391 Psest_0392
stress Paraquat dichloride 0.015 mg/ml N.D. -0.6 -1.7 N.D. -0.3
stress Def Fusidic 0.032 mg/ml N.D. -0.4 -1.8 N.D. -0.4
nitrogen source L-Isoleucine (N) N.D. -0.0 -0.9 N.D. -1.2
stress Def Phosphomycin 0.125 mg/ml N.D. -1.7 +0.1 N.D. -0.3
nitrogen source nitrate (N) N.D. -0.0 -1.0 N.D. -0.7
stress Lactate-nitrate; anaerobic; copper stress sample1 N.D. -0.7 -0.3 N.D. -0.7
nitrogen source D-Alanine (N) N.D. -1.2 -0.4 N.D. -0.1
stress Def Vancomycin 0.016 mg/ml N.D. +0.3 -1.0 N.D. -0.8
RCH2 grown on a colony of 8R2A N.D. +0.3 -1.2 N.D. -0.5
nitrogen source L-Glutamic (N) N.D. +0.2 -1.2 N.D. -0.3
temperature Glucose defined media 37C sample1 N.D. -1.2 -0.3 N.D. +0.3
stress Doxycycline hyclate 0.0002 mg/ml N.D. +0.5 -1.4 N.D. -0.2
stress Vanillin 2 mM N.D. -1.3 +0.2 N.D. +0.2
nitrogen source nitrite (N) N.D. -0.3 +0.7 N.D. -0.9
carbon source D-Gluconic Acid (C) N.D. +0.6 -0.9 N.D. -0.1
nitrogen source nitrate (N) N.D. +0.8 -0.4 N.D. -0.6
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. +0.3 +0.8 N.D. -1.2
stress perchlorate 25 mM N.D. +0.7 -0.8 N.D. -0.1
stress benzoic 0.4 mg/ml N.D. -0.8 +0.7 N.D. +0.2
stress Def Carbenicillin 0.008 mg/ml N.D. +0.2 +1.0 N.D. -1.0
carbon source L-Lactate (C) N.D. +0.1 +0.8 N.D. -0.7
anaerobic nitrate reduction - anaerobic N.D. +1.0 -0.1 N.D. -0.6
stress Cephalothin 0.04 mg/ml N.D. +0.8 +0.4 N.D. -0.5
stress Furfuryl Alcohol 0.05 vol% N.D. -0.9 +0.0 N.D. +1.8
stress Def Nalidixic 0.001 mg/ml N.D. +0.9 +0.6 N.D. -0.4
stress Fusidic 0.016 mg/ml N.D. +0.8 +0.7 N.D. -0.4
stress methylglyoxal 0.0016 vol% N.D. -0.4 +0.8 N.D. +1.0
stress Spectinomycin 0.00625 mg/ml N.D. +0.7 +0.8 N.D. -0.2
carbon source RCH2 defined media N.D. +1.2 +0.5 N.D. -0.2
stress Chlorate 75 mM N.D. +0.9 +0.6 N.D. +1.2
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