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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_3907 and Psest_3908 are separated by 67 nucleotides
Psest_3908 and Psest_3909 are separated by 54 nucleotides
Psest_3909 and Psest_3910 are separated by 152 nucleotides
Psest_3910 and Psest_3911 are separated by 63 nucleotides
Psest_3907: Psest_3907 - Uncharacterized conserved protein, at 4,076,636 to 4,077,310
_3907
Psest_3908: Psest_3908 - Cytochrome c553, at 4,077,378 to 4,077,716
_3908
Psest_3909: Psest_3909 - Glucose/sorbosone dehydrogenases, at 4,077,771 to 4,079,039
_3909
Psest_3910: Psest_3910 - Uncharacterized protein conserved in bacteria, at 4,079,192 to 4,079,650
_3910
Psest_3911: Psest_3911 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 4,079,714 to 4,081,102
_3911
Group
Condition
Psest
_3907
Psest
_3908
Psest
_3909
Psest
_3910
Psest
_3911
stress
Benzethonium chloride 0.01 mM
+0.2
-1.1
+0.1
-6.3
-0.3
nitrogen source
nitrite (N)
-0.3
-1.9
-0.3
-3.9
+0.1
stress
Def Phosphomycin 0.125 mg/ml
-0.4
-0.8
-0.3
-2.5
-0.4
stress
Def Neomycin 0.0008 mg/ml
+0.2
-1.3
-0.2
-3.9
+1.0
stress
A22 0.002 mg/ml
-0.1
+0.0
-0.1
-3.5
-0.2
nitrogen source
L-Isoleucine (N)
-0.6
-1.0
-0.8
-0.4
-0.7
stress
nitrate 250 mM
+0.2
-3.1
+0.3
-0.7
-0.1
stress
2-Furfuraldehyde 0.05 vol%
-0.3
-1.9
-0.3
-1.1
+0.2
RCH2 grown on a colony of ecoli
+0.2
-0.7
+0.2
-2.8
-0.3
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.2
-1.6
+0.3
-1.0
-0.6
carbon source
RCH2 defined media
+0.0
-0.5
+0.2
-2.9
+0.1
stress
Cobalt chloride 0.05 mM
-0.2
+0.3
-0.0
-3.2
+0.1
stress
Def Benzethonium chloride 0.008 mM
+0.1
-0.3
+0.1
-2.9
+0.1
stress
Lomefloxacin 0.0001 mM
+0.0
-0.2
+0.3
-3.2
+0.1
RCH2 grown on a colony of N2A2
-0.3
-2.4
+0.3
-0.5
+0.2
stress
Zinc 0.12 mM
-0.1
+0.4
+0.3
-2.6
-0.4
stress
Nalidixic 0.00390625 mg/ml
+0.2
+0.4
-0.2
-2.9
+0.2
stress
Def Dimethyl Sulfoxide 5 vol%
+0.3
-1.2
+0.1
-1.6
+0.2
stress
Def Cephalothin 0.04 mg/ml
+0.2
+0.1
+0.3
-3.0
+0.6
RCH2 grown on a colony of 8R2A
+0.4
-3.2
-0.0
+0.8
+0.2
carbon source
propionate (C)
+0.5
-1.0
+0.6
-1.2
-0.3
stress
A22 0.005 mg/ml
-0.2
-2.7
-0.1
+1.7
+0.1
temperature
LB 26C sample1
-0.3
-1.9
-0.2
+1.4
+0.0
stress
methylglyoxal 0.0016 vol%
-0.2
-1.0
+0.2
+2.0
-0.4
stress
Def Chlorate 40 mM
+0.4
-1.7
+0.0
+1.7
+0.4
RCH2 grown on a colony of N2F3
+0.2
-0.4
-0.0
+2.5
-0.7
RCH2 grown on a colony of N2F3
+0.1
-0.9
-0.4
+2.7
+0.3
stress
Def Chloride 400 mM
+1.0
-0.9
+0.2
+1.5
+0.2
stress
Def Thallium(I) acetate 0.125 mg/ml
+0.6
-0.4
+0.6
+1.3
+0.7
stress
Fusidic 0.016 mg/ml
+0.2
-0.2
+0.4
+2.1
+0.5
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