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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_3884 and Psest_3885 are separated by 76 nucleotides
Psest_3885 and Psest_3886 are separated by 12 nucleotides
Psest_3886 and Psest_3887 overlap by 4 nucleotides
Psest_3887 and Psest_3888 overlap by 4 nucleotides
Psest_3884: Psest_3884 - Signal transduction histidine kinase, at 4,053,878 to 4,055,275
_3884
Psest_3885: Psest_3885 - conserved hypothetical protein, steroid delta-isomerase-related, at 4,055,352 to 4,055,795
_3885
Psest_3886: Psest_3886 - Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit, at 4,055,808 to 4,057,457
_3886
Psest_3887: Psest_3887 - Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit, at 4,057,454 to 4,058,950
_3887
Psest_3888: Psest_3888 - Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit, at 4,058,947 to 4,060,371
_3888
Group
Condition
Psest
_3884
Psest
_3885
Psest
_3886
Psest
_3887
Psest
_3888
stress
Bacitracin 0.25 mg/ml
-4.2
N.D.
+0.0
-0.5
-0.1
RCH2 grown on a colony of Serratia
-4.3
N.D.
+0.1
-0.3
+0.1
stress
Doxycycline hyclate 0.0002 mg/ml
-4.2
N.D.
-0.0
-0.0
-0.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-4.3
N.D.
-0.1
+0.1
+0.2
stress
Paraquat dichloride 0.015 mg/ml
-3.1
N.D.
-0.1
+0.2
-0.2
stress
Def Fusidic 0.032 mg/ml
-2.8
N.D.
+0.0
-0.2
-0.2
stress
Nalidixic 0.001 mg/ml
-3.3
N.D.
+0.2
+0.1
-0.0
stress
Def Vancomycin 0.016 mg/ml
-2.9
N.D.
+0.0
-0.3
-0.0
stress
Def Cephalothin 0.08 mg/ml
-1.4
N.D.
-0.4
-0.4
-0.8
stress
Def Tetracycline 0.0004 mg/ml
-3.0
N.D.
+0.0
+0.2
-0.0
stress
Bacitracin 0.25 mg/ml
-2.4
N.D.
-0.0
-0.3
-0.1
stress
Cephalothin 0.04 mg/ml
-3.6
N.D.
+0.3
+0.1
+0.4
carbon source
Trisodium citrate (C)
-2.6
N.D.
-0.0
-0.0
+0.2
stress
Nalidixic 0.00390625 mg/ml
-3.2
N.D.
+0.1
+0.1
+0.4
stress
Def Benzalkonium Chloride 0.002 mg/ml
-2.8
N.D.
+0.4
+0.1
+0.3
RCH2 grown on a colony of N2A2
-2.3
N.D.
+0.4
+0.0
-0.1
stress
Gentamicin 0.0016 mg/ml
-2.0
N.D.
+0.5
-0.3
+0.0
carbon source
propionate (C)
-2.1
N.D.
+0.1
+0.4
-0.2
stress
Def Nalidixic 0.001 mg/ml
-2.2
N.D.
+0.2
+0.4
+0.0
stress
L-Lysine 200 mM
-2.0
N.D.
+0.2
+0.4
+0.3
stress
Fusidic 0.016 mg/ml
-1.8
N.D.
+0.6
+0.4
+0.6
stress
Def Polymyxin B sulfate 0.00008 mg/ml
-1.7
N.D.
+0.7
+0.4
+0.4
stress
Choline Lysine 20 mM
+2.0
N.D.
+0.1
+0.5
-0.3
RCH2 grown on a colony of ecoli
+2.5
N.D.
-0.3
+0.2
+0.2
stress
Chlorate 75 mM
+2.3
N.D.
+0.6
-0.1
+0.2
stress
nitrate 250 mM
+2.2
N.D.
+0.8
+0.1
+0.2
stress
nitrate 200 mM
+2.4
N.D.
+0.3
+0.6
+0.1
stress
Def 2-Furfuraldehyde 0.032 vol%
+2.5
N.D.
+0.5
+0.3
+0.9
stress
Neomycin 0.004 mg/ml
+5.1
N.D.
-0.0
-0.2
+0.4
stress
Neomycin 0.004 mg/ml
+4.4
N.D.
+0.3
+0.3
+0.3
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