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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_3857 and Psest_3858 are separated by 86 nucleotides
Psest_3858 and Psest_3859 are separated by 103 nucleotides
Psest_3859 and Psest_3860 are separated by 10 nucleotides
Psest_3860 and Psest_3861 are separated by 159 nucleotides
Psest_3857: Psest_3857 - ATPases involved in chromosome partitioning, at 4,028,939 to 4,029,712
_3857
Psest_3858: Psest_3858 - thymidylate synthase, at 4,029,799 to 4,030,593
_3858
Psest_3859: Psest_3859 - prolipoprotein diacylglyceryl transferase, at 4,030,697 to 4,031,497
_3859
Psest_3860: Psest_3860 - Predicted permeases, at 4,031,508 to 4,032,290
_3860
Psest_3861: Psest_3861 - Uncharacterized conserved protein, at 4,032,450 to 4,033,206
_3861
Group
Condition
Psest
_3857
Psest
_3858
Psest
_3859
Psest
_3860
Psest
_3861
stress
Thallium(I) acetate 0.09 mg/ml
-0.2
N.D.
N.D.
-3.8
-0.2
carbon source
propionate (C)
-0.8
N.D.
N.D.
-3.3
+0.4
stress
Thallium(I) acetate 0.1 mg/ml
-0.9
N.D.
N.D.
-2.5
-0.3
stress
Choline chloride 90 mM
-0.2
N.D.
N.D.
-2.5
-0.1
stress
nitrate 250 mM
+0.1
N.D.
N.D.
-2.1
-0.7
radiation
Ionizing radiation, 319.06 Gy,
-0.6
N.D.
N.D.
-1.6
-0.4
stress
Def Chlorate 40 mM
-1.0
N.D.
N.D.
-1.1
-0.3
radiation
Ionizing radiation, 319.06 Gy,
-1.2
N.D.
N.D.
-0.8
-0.3
stress
Def Thallium(I) acetate 0.125 mg/ml
-0.2
N.D.
N.D.
-1.9
-0.1
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.0
N.D.
N.D.
-1.3
-0.8
lb
LB
-0.3
N.D.
N.D.
-1.2
-0.4
nutrient
Min media with glucose
-0.1
N.D.
N.D.
-1.1
-0.7
carbon source
L-Asparagine (C)
+0.2
N.D.
N.D.
-1.6
-0.3
stress
Chlorate 75 mM
+0.3
N.D.
N.D.
-1.3
-0.6
carbon source
acetate (C)
-0.7
N.D.
N.D.
-1.1
+0.3
stress
5-Hydroxymethylfurfural 5 mM
+0.4
N.D.
N.D.
-1.4
-0.5
stress
Lactate-nitrate; anaerobic; copper stress sample1
-0.2
N.D.
N.D.
-1.8
+0.6
stress
Thallium(I) acetate 0.1 mg/ml
+0.4
N.D.
N.D.
-1.3
-0.4
carbon source
propionate (C)
+0.5
N.D.
N.D.
-2.1
+0.3
stress
Thallium(I) acetate 0.08 mg/ml
-0.2
N.D.
N.D.
-1.5
+0.4
RCH2 grown on a colony of N2C3
-0.0
N.D.
N.D.
-1.5
+0.3
stress
Nickel (II) chloride 0.8 mM
+0.3
N.D.
N.D.
-0.9
-0.7
RCH2 grown on a colony of Serratia
-0.4
N.D.
N.D.
-1.4
+0.7
stress
Carbenicillin 0.0065 mg/ml
+0.3
N.D.
N.D.
-1.4
+0.2
stress
Spectinomycin 0.00625 mg/ml
+0.6
N.D.
N.D.
-1.2
-0.1
stress
Cephalothin 0.04 mg/ml
+0.4
N.D.
N.D.
-1.1
+0.4
stress
Phosphomycin 0.012 mg/ml
+0.5
N.D.
N.D.
-1.0
+0.4
stress
nitrate 200 mM
-0.4
N.D.
N.D.
+1.3
-0.5
RCH2 grown on a colony of ecoli
+0.8
N.D.
N.D.
-0.8
+0.8
stress
Furfuryl Alcohol 0.05 vol%
+0.3
N.D.
N.D.
+2.1
+0.7
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