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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_3854 and Psest_3855 overlap by 1 nucleotides
Psest_3855 and Psest_3856 overlap by 1 nucleotides
Psest_3856 and Psest_3857 are separated by 27 nucleotides
Psest_3857 and Psest_3858 are separated by 86 nucleotides
Psest_3854: Psest_3854 - ABC-type branched-chain amino acid transport systems, ATPase component, at 4,026,334 to 4,027,038
_3854
Psest_3855: Psest_3855 - Branched-chain amino acid ABC-type transport system, permease components, at 4,027,038 to 4,027,925
_3855
Psest_3856: Psest_3856 - ABC-type branched-chain amino acid transport system, permease component, at 4,027,925 to 4,028,911
_3856
Psest_3857: Psest_3857 - ATPases involved in chromosome partitioning, at 4,028,939 to 4,029,712
_3857
Psest_3858: Psest_3858 - thymidylate synthase, at 4,029,799 to 4,030,593
_3858
Group
Condition
Psest
_3854
Psest
_3855
Psest
_3856
Psest
_3857
Psest
_3858
radiation
Ionizing radiation, 319.06 Gy,
-0.3
-0.8
-0.1
-1.2
N.D.
stress
Paraquat dichloride 0.015 mg/ml
-0.7
-0.3
-0.4
-0.3
N.D.
stress
Def Chlorate 40 mM
-0.1
-0.2
-0.3
-1.0
N.D.
stress
perchlorate 12.5 mM
+0.2
-0.3
-0.2
-0.8
N.D.
RCH2 grown on a colony of N2C3
-1.1
+0.3
-0.0
-0.0
N.D.
stress
Thallium(I) acetate 0.1 mg/ml
-0.2
+0.3
+0.0
-0.9
N.D.
stress
Vanillin 2 mM
-0.4
-0.6
+0.0
+0.3
N.D.
stress
L-Lysine 200 mM
-0.1
+0.4
-0.2
-0.6
N.D.
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.3
-0.5
+0.1
-0.4
N.D.
stress
nitrate 200 mM
+0.5
-0.6
+0.0
-0.4
N.D.
radiation
Ionizing radiation, 319.06 Gy,
+0.4
-0.0
-0.3
-0.6
N.D.
stress
Chloride 200 mM
-0.2
+0.5
-0.2
-0.6
N.D.
stress
D-Cycloserine 0.032 mg/ml
+0.6
-0.3
+0.2
-0.8
N.D.
RCH2 grown on a colony of N2F3
-0.5
+0.6
-0.0
-0.3
N.D.
carbon source
propionate (C)
+0.3
+0.4
-0.2
-0.8
N.D.
nitrogen source
L-Glutamic (N)
-0.4
-0.3
+0.2
+0.4
N.D.
stress
syringaldehyde 3 mM
-0.6
+0.3
+0.2
+0.2
N.D.
RCH2 grown on a colony of Serratia
+0.8
-0.1
-0.0
-0.5
N.D.
carbon source
L-tyrosine (C)
+0.6
-0.1
+0.2
-0.4
N.D.
RCH2 grown on a colony of ecoli
-0.4
-0.3
+0.1
+0.8
N.D.
RCH2 grown on a colony of Serratia
+0.4
-0.0
+0.4
-0.4
N.D.
stress
Spectinomycin 0.00625 mg/ml
+0.3
-0.3
+0.1
+0.6
N.D.
carbon source
propionate (C)
+0.1
+0.5
-0.5
+0.5
N.D.
stress
Chlorate 75 mM
+0.6
+0.4
-0.2
+0.3
N.D.
stress
Def 2-Furfuraldehyde 0.032 vol%
+0.6
+0.1
-0.1
+0.7
N.D.
stress
Vancomycin 0.016 mg/ml
+0.4
+0.4
-0.1
+0.5
N.D.
stress
5-Hydroxymethylfurfural 5 mM
+0.5
+0.3
+0.0
+0.4
N.D.
stress
Def Phosphomycin 0.125 mg/ml
+0.5
+0.4
+0.3
+0.2
N.D.
stress
A22 0.002 mg/ml
+0.1
+0.5
+0.3
+0.5
N.D.
nitrogen source
nitrite (N)
+0.3
+0.1
+0.4
+0.7
N.D.
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