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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_0375 and Psest_0376 are separated by 92 nucleotides
Psest_0376 and Psest_0377 are separated by 108 nucleotides
Psest_0377 and Psest_0378 are separated by 93 nucleotides
Psest_0378 and Psest_0379 are separated by 126 nucleotides
Psest_0375: Psest_0375 - NAD-dependent aldehyde dehydrogenases, at 402,072 to 403,514
_0375
Psest_0376: Psest_0376 - glucarate dehydratase, at 403,607 to 404,947
_0376
Psest_0377: Psest_0377 - galactarate dehydratase, at 405,056 to 406,621
_0377
Psest_0378: Psest_0378 - Lactate dehydrogenase and related dehydrogenases, at 406,715 to 407,644
_0378
Psest_0379: Psest_0379 - Galactose mutarotase and related enzymes, at 407,771 to 408,661
_0379
Group
Condition
Psest
_0375
Psest
_0376
Psest
_0377
Psest
_0378
Psest
_0379
radiation
Ionizing radiation, 319.06 Gy,
-0.2
-0.9
-0.1
-1.3
-0.6
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-0.4
-0.8
+0.1
-1.0
-0.7
stress
Furfuryl Alcohol 0.05 vol%
+0.1
-0.9
+0.4
-0.8
-1.1
stress
methylglyoxal 0.0016 vol%
+0.0
-0.5
+0.1
-1.1
-0.8
nitrogen source
L-Alanine (N)
-0.1
-0.5
+0.1
-1.4
-0.3
RCH2 grown on a colony of Serratia
-0.2
-0.6
-0.2
-1.3
+0.4
carbon source
L-tyrosine (C)
-0.6
-2.0
+0.3
+0.7
-0.1
stress
Def A22 0.015 mg/ml
-0.3
-0.3
+0.1
+0.7
-1.4
vitamin
With vitamins t1
-0.2
+0.6
+0.1
-0.3
-1.1
stress
A22 0.005 mg/ml
-0.3
+0.4
-0.4
+0.6
-0.6
carbon source
L-tyrosine (C)
-0.4
-0.6
+0.3
+0.9
-0.4
stress
Choline chloride 90 mM
-0.1
-1.2
+0.3
-0.0
+0.9
stress
Def Neomycin 0.0008 mg/ml
+0.2
-0.4
-0.4
+0.7
+0.7
stress
Def Chlorate 40 mM
+0.1
-0.4
-0.2
+1.3
+0.5
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.4
+0.1
+0.1
+0.8
+0.9
stress
Def Chlorate 20 mM
+0.3
-0.8
+0.1
+1.5
+0.5
stress
Def Carbenicillin 0.008 mg/ml
-0.4
-0.4
+0.2
+1.3
+0.9
stress
Def 5-Hydroxymethylfurfural 5 mM
-0.1
+0.2
-0.2
+1.0
+0.8
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.4
+0.8
-0.1
+0.6
+0.4
stress
Cephalothin 0.04 mg/ml
+0.1
+0.1
+0.2
+0.7
+1.3
stress
Fusidic 0.016 mg/ml
+0.1
+0.3
+0.1
+0.9
+1.0
stress
Benzalkonium Chloride 0.002 mg/ml
+0.3
-0.0
+0.3
+1.1
+0.7
nitrogen source
nitrite (N)
+0.4
+0.4
+0.3
+0.4
+0.8
stress
Def Benzethonium chloride 0.008 mM
+0.3
+0.2
+0.3
+0.9
+1.0
stress
Def Thallium(I) acetate 0.125 mg/ml
+0.2
+0.6
+0.2
+0.5
+1.2
stress
Def Nalidixic 0.001 mg/ml
+0.2
+0.4
-0.1
+1.2
+1.0
stress
Chlorate 75 mM
+0.1
+0.5
-0.1
+1.4
+0.9
stress
Def Polymyxin B sulfate 0.0001 mg/ml
-0.0
+0.0
+0.2
+1.6
+1.2
RCH2 grown on a colony of N2A2
+0.2
+1.0
+0.5
+0.7
+0.7
stress
Def Polymyxin B sulfate 0.00008 mg/ml
+0.1
+0.1
+0.4
+1.7
+1.0
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