Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3815 and Psest_3816 are separated by 115 nucleotidesPsest_3816 and Psest_3817 are separated by 60 nucleotidesPsest_3817 and Psest_3818 are separated by 104 nucleotidesPsest_3818 and Psest_3819 are separated by 43 nucleotides Psest_3815: Psest_3815 - guanylate kinase, at 3,985,421 to 3,986,041 _3815 Psest_3816: Psest_3816 - DNA-directed RNA polymerase, omega subunit, at 3,986,157 to 3,986,420 _3816 Psest_3817: Psest_3817 - (p)ppGpp synthetase, RelA/SpoT family, at 3,986,481 to 3,988,589 _3817 Psest_3818: Psest_3818 - endoribonuclease L-PSP, putative, at 3,988,694 to 3,989,074 _3818 Psest_3819: Psest_3819 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 3,989,118 to 3,989,690 _3819
Group Condition Psest_3815 Psest_3816 Psest_3817 Psest_3818 Psest_3819
temperature Glucose defined 30C timecourse1 timepoint 3 N.D. -0.7 N.D. -6.1 +0.1
carbon source D-Lactate (C) N.D. +0.2 N.D. -6.5 -0.4
nitrogen source L-Alanine (N) N.D. -0.5 N.D. -5.4 -0.7
carbon source L-Lactate (C) N.D. +0.0 N.D. -6.2 -0.4
nitrogen source nitrate (N) N.D. -2.0 N.D. -4.2 -0.3
nitrogen source Adenine (N) N.D. -0.7 N.D. -4.9 -0.7
nitrogen source L-Glutamine (N) N.D. -0.5 N.D. -5.4 -0.2
nitrogen source L-Alanine (N) N.D. +0.6 N.D. -7.1 +0.4
nitrogen source Urea (N) N.D. -0.3 N.D. -5.4 -0.2
carbon source D,L-Lactate (C) N.D. +0.3 N.D. -6.2 -0.1
stress Def Benzethonium chloride 0.008 mM N.D. -1.0 N.D. -5.1 +0.2
nitrogen source L-Alanine (N) N.D. +0.2 N.D. -6.5 +0.4
stress Def Polymyxin B sulfate 0.0001 mg/ml N.D. -0.6 N.D. -4.8 -0.1
nitrogen source Cytosine (N) N.D. -0.6 N.D. -4.9 +0.0
carbon source L-Lactate (C) N.D. +0.1 N.D. -6.0 +0.6
carbon source pyruvate (C) N.D. +0.1 N.D. -5.2 -0.2
carbon source D-Lactate (C) N.D. +0.8 N.D. -5.7 -0.3
carbon source L-Glutamine (C) N.D. +0.3 N.D. -4.7 -0.5
carbon source D-Maltose (C) N.D. +0.9 N.D. -5.3 -0.6
carbon source D,L-Lactate (C) N.D. +0.7 N.D. -5.5 -0.2
nitrogen source Urea (N) N.D. +0.2 N.D. -5.5 +0.4
nitrogen source nitrite (N) N.D. -0.2 N.D. -5.1 +0.6
nitrogen source D-Alanine (N) N.D. +0.5 N.D. -4.9 +0.2
nitrogen source L-Glutamine (N) N.D. +0.5 N.D. -5.4 +0.7
nitrogen source nitrate (N) N.D. +1.2 N.D. -4.7 -0.6
nitrogen source L-Asparagine (N) N.D. +0.8 N.D. -4.9 +0.0
nitrogen source nitrate (N) N.D. +0.5 N.D. -4.8 +0.3
nitrogen source L-Asparagine (N) N.D. +1.2 N.D. -5.2 +0.4
nitrogen source L-Glutamic (N) N.D. +1.1 N.D. -4.0 -0.4
stress Def 2-Furfuraldehyde 0.032 vol% N.D. +1.0 N.D. -3.7 +1.0
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