Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3813 and Psest_3814 are separated by 151 nucleotidesPsest_3814 and Psest_3815 are separated by 69 nucleotidesPsest_3815 and Psest_3816 are separated by 115 nucleotidesPsest_3816 and Psest_3817 are separated by 60 nucleotides Psest_3813: Psest_3813 - ribonuclease PH, at 3,983,614 to 3,984,336 _3813 Psest_3814: Psest_3814 - TIGR00255 family protein, at 3,984,488 to 3,985,351 _3814 Psest_3815: Psest_3815 - guanylate kinase, at 3,985,421 to 3,986,041 _3815 Psest_3816: Psest_3816 - DNA-directed RNA polymerase, omega subunit, at 3,986,157 to 3,986,420 _3816 Psest_3817: Psest_3817 - (p)ppGpp synthetase, RelA/SpoT family, at 3,986,481 to 3,988,589 _3817
Group Condition Psest_3813 Psest_3814 Psest_3815 Psest_3816 Psest_3817
stress Vancomycin 0.016 mg/ml +0.1 N.D. N.D. -3.9 N.D.
stress Spectinomycin 0.00625 mg/ml -1.7 N.D. N.D. -1.9 N.D.
anaerobic Nitrite/ lactate media with Nitrite 20mM -0.8 N.D. N.D. -2.5 N.D.
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample2 -0.2 N.D. N.D. -3.0 N.D.
stress Chlorite 0.06 mM -0.9 N.D. N.D. -2.2 N.D.
RCH2 grown on a colony of N2C3 +0.3 N.D. N.D. -3.2 N.D.
stress Doxycycline hyclate 0.0002 mg/ml -0.7 N.D. N.D. -2.0 N.D.
stress Choline chloride 90 mM +0.8 N.D. N.D. -3.5 N.D.
temperature LB 30C timecourse2 timepoint 2 -0.3 N.D. N.D. -2.4 N.D.
stress Benzethonium chloride 0.0125 mM -0.1 N.D. N.D. -2.5 N.D.
stress L-Lysine 200 mM +0.9 N.D. N.D. -3.4 N.D.
radiation Ionizing radiation, 319.06 Gy, +0.2 N.D. N.D. -2.6 N.D.
RCH2 grown on a colony of Serratia -0.7 N.D. N.D. -1.7 N.D.
stress Lactate-nitrate; anaerobic; cadmium stress sample3 +0.0 N.D. N.D. -2.4 N.D.
nitrogen source nitrate (N) -0.3 N.D. N.D. -2.0 N.D.
stress Nickel (II) chloride 0.9 mM +0.3 N.D. N.D. -2.6 N.D.
stress Anaerobic 50 uM Lead (II) nitrate sample3 -0.2 N.D. N.D. -2.1 N.D.
nitrogen source Putrescine (N) -0.2 N.D. N.D. -2.1 N.D.
stress nitrite 2.5 mM +0.7 N.D. N.D. -2.5 N.D.
stress Choline chloride 90 mM +0.7 N.D. N.D. -2.5 N.D.
radiation Ionizing radiation, 319.06 Gy, +0.4 N.D. N.D. -1.9 N.D.
stress Nalidixic 0.00390625 mg/ml +0.7 N.D. N.D. -2.2 N.D.
stress Fusidic 0.016 mg/ml +0.9 N.D. N.D. -1.5 N.D.
stress L-Lysine 200 mM +1.0 N.D. N.D. -1.5 N.D.
stress Def Carbenicillin 0.02 mg/ml +1.2 N.D. N.D. -1.7 N.D.
stress Phosphomycin 0.012 mg/ml +1.1 N.D. N.D. -1.6 N.D.
stress D-Cycloserine 0.032 mg/ml +1.6 N.D. N.D. -0.9 N.D.
carbon source L-tyrosine (C) -0.8 N.D. N.D. +2.1 N.D.
stress methylglyoxal 0.0016 vol% +0.3 N.D. N.D. +2.1 N.D.
stress Polymyxin B sulfate 0.0001 mg/ml +1.2 N.D. N.D. +1.3 N.D.
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